Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02861 ATGGGTGAGGAAAACCAAGTCATCGAAAACAAACCTGCCCTTTACAAGGGTCTCCTTAACAGTGATGCACTTTATAATTATATACTTGAAACCAATGTGTTTCCGAGAGAGCATCCATGTTTGAAGGAGCTTCGTGAGATGACAGAAATACACTCTCAGGGCATTATGCTTATACCTGCTGATGAAGGACAGTTTTTAAGCTTGTTGATTAAGCTGATGAATGCAAAGAAGACAATGGAGATTGGTGTGTACACTGGCTACTCTCTTCTCTCCACTGCTCTTGCTCTTCCCTCTGATGGAACGATATTGGCTTTAGACATTAGTCGTGAATACTTTGAGTTGGGATTGCCCATGATTAAAAAAGCTGGAGTGGATCACAAGATTGAATTTAGAGAAGGACCTGCTGTTGATCTTTTAGATGAAATTCTTCAAGATGAAAATAACAAGGGAACATTTGATTTTATTTTTGTGGATGCTGATAAGAATAATTACTTAAACTATCACAAGAGAGTAATTGAGCTTGTTAAAGTTGGGGGATTGATTGGATACGATAACACCTTATGGTGTGGATCAGTAGTGGCTCCACCTGATACTATTATTTATGAAACCATTCGGAACTTACGTGAATATGTGATTGAGTTTAACAAGTATATAGCTCAAGATTCAAGATTTGAGGTTTGTCTGGTTTCTATAGGAGATGGGATTACCCTATGTCGCCGCATCAACTAA 729 0.3827 MGEENQVIENKPALYKGLLNSDALYNYILETNVFPREHPCLKELREMTEIHSQGIMLIPADEGQFLSLLIKLMNAKKTMEIGVYTGYSLLSTALALPSDGTILALDISREYFELGLPMIKKAGVDHKIEFREGPAVDLLDEILQDENNKGTFDFIFVDADKNNYLNYHKRVIELVKVGGLIGYDNTLWCGSVVAPPDTIIYETIRNLREYVIEFNKYIAQDSRFEVCLVSIGDGITLCRRIN 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02861 242 Gene3D Vaccinia Virus protein VP39 9 242 IPR029063 -
Vivi1g02861 242 PANTHER O-METHYLTRANSFERASE-RELATED 16 241 - -
Vivi1g02861 242 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 21 240 IPR029063 -
Vivi1g02861 242 FunFam Caffeoyl-CoA O-methyltransferase 1 10 242 - -
Vivi1g02861 242 Pfam O-methyltransferase 37 241 IPR002935 GO:0008171
Vivi1g02861 242 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 17 241 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02861 Vivi-Chr1 62195756 62199128 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02861 3 242 Monolignol Biosynthesis Gene Families AT4G34050 63.750 2.47e-115 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02861 K00588 - gmx:100795858 342.428