Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02857 ATGGCTGTGAATAATGATGAGAAACAGCAAAACAAACCCATCGGACACAGTCCACTCGCTCACAAGAGTCTCCTTCAAAGTGATGCACTCTATCAGTATATACTTGAGACGAGTGTGTTTCCAAGAGAGCATCCATGTTTGAAGGAGCTTCGTGAGATGACAGAAAAACATCCTCGGAACCATATGGCTACACCTGCTGATGAAGGACAACTTCTAAGCATGCTGATTAAGCTCATCAATGCAAAAAACACATTGGAAATTGGTGTCTTCACTGGTTATTCTCTCCTCTCCACTGCTCTTGCTCTTCCTTCTGATGGAAAGGTATTAGCTTTGGATGTGAGTCGTGAATACTATGAGTTGGGATTATCCATAATTGAAAAAGCTGGAGTTGCTAACAAGATCGACTTTAGAGAAGGACGTGCTCTTCCTCTTCTTGATGAACTTCTTCAAGACGAAAATAACAAGGGGACATTTGATTTTGTTTTTGTGGATGCTGATAAGGATAATTACTTAAACTATCACAAGAGAGTAATTGAACTTGTGAAAATTGGGGGATTGATCGGGTACGATAACACCTTATGGAGTGGATCTGTGGCAGCTCCGTCTGATGCACCTATGCTGGATAATATTAAGCGTCTACGAGGTTATGTGATTGAGTTCAACAAATATCTAGCTCATGATTCAAGAATTGAGATTTGTCAGCTTCCGGTAGGTGATGGAATTACCCTGTGCCGCCGCATTAGCTGA 747 0.415 MAVNNDEKQQNKPIGHSPLAHKSLLQSDALYQYILETSVFPREHPCLKELREMTEKHPRNHMATPADEGQLLSMLIKLINAKNTLEIGVFTGYSLLSTALALPSDGKVLALDVSREYYELGLSIIEKAGVANKIDFREGRALPLLDELLQDENNKGTFDFVFVDADKDNYLNYHKRVIELVKIGGLIGYDNTLWSGSVAAPSDAPMLDNIKRLRGYVIEFNKYLAHDSRIEICQLPVGDGITLCRRIS 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02857 248 PANTHER O-METHYLTRANSFERASE-RELATED 21 247 - -
Vivi1g02857 248 CDD AdoMet_MTases 85 187 - -
Vivi1g02857 248 Gene3D Vaccinia Virus protein VP39 15 248 IPR029063 -
Vivi1g02857 248 FunFam Caffeoyl-CoA O-methyltransferase 1 16 248 - -
Vivi1g02857 248 Pfam O-methyltransferase 37 247 IPR002935 GO:0008171
Vivi1g02857 248 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 23 247 IPR002935 GO:0008171
Vivi1g02857 248 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 27 246 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02857 Vivi-Chr1 62148453 62152350 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02857 4 248 Monolignol Biosynthesis Gene Families AT4G34050 71.020 1.41e-130 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02857 K00588 - gmx:100305498 402.134