Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02856 ATGGCTGGCAATAACAAACTCATCGATATCTATATTCACAAGACTCTCCTTAACAGTGATGCACTTCATAACTATATACTTGAAACCAATGTGTTTCCAAGAGAGCATCCATGTTTGAAGGAACTTCGTGAGATGACAGAAAACCACCATGGGAACATTATGATTGTACCTGCTGATGAAGGACAGCTTATAAGCATGCTAATTAAGCTCATCAATGCGAAGAAGACGATGGAGATTGGTGTTTACACTGGCTACTCTCTCCTCTCCACCGTGCTTGCTCTCCCCTCTGATGGAAAGGTATTGGCTTTAGACATCAGTCGCGAATACTTTGAGCTAGGATTGCCCATGATAAAAAAAGCTGGAGTGGATCACAAGATTGAATTTAGAGAAGGACATGCTGTTGGTCTCTTAGATGAAATTCTTCAAGATGAAAATAATAAGGGGACATTTGATTTTATTTTTGTGGATGCTGATAAGGATAACTACTTAAACTATCACAAGAAGGTAATTGAACTTGTGAAAATTGGGGGATTAATCGGATATGATAACACTTTATGGAGTGGATCAGTGGCGGCTCCCGCAGATGCACCTATGAATGACCTCATTAGGAGCTTACGTGACTATGTGATTGAGTTCAATAAATATATAGCTAAAGATTCAAGGGTAGAGATTTGTCAGCTTTCTGTAGGAGATGGAATTACGCTGTGCCGCCGCATCGACTGA 723 0.4025 MAGNNKLIDIYIHKTLLNSDALHNYILETNVFPREHPCLKELREMTENHHGNIMIVPADEGQLISMLIKLINAKKTMEIGVYTGYSLLSTVLALPSDGKVLALDISREYFELGLPMIKKAGVDHKIEFREGHAVGLLDEILQDENNKGTFDFIFVDADKDNYLNYHKKVIELVKIGGLIGYDNTLWSGSVAAPADAPMNDLIRSLRDYVIEFNKYIAKDSRVEICQLSVGDGITLCRRID 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02856 240 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 19 238 IPR029063 -
Vivi1g02856 240 FunFam Caffeoyl-CoA O-methyltransferase 1 9 240 - -
Vivi1g02856 240 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 15 239 IPR002935 GO:0008171
Vivi1g02856 240 PANTHER O-METHYLTRANSFERASE-RELATED 13 239 - -
Vivi1g02856 240 Gene3D Vaccinia Virus protein VP39 6 240 IPR029063 -
Vivi1g02856 240 Pfam O-methyltransferase 35 239 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02856 Vivi-Chr1 62082416 62083879 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02856 13 239 Monolignol Biosynthesis Gene Families AT4G34050 68.722 1.02e-117 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02856 K00588 - gmx:100305498 355.525