Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02842 ATGGATTCCGTGAAAGTAATATCCACATCTACAATCCAAGCACCGGTTCACAACAACGGCAACTCAACTCAGAATCAGAATCAGACAATCGAACTAACACCATGGGATCTTCAGTTCCTCCCACTTGAAACCATTCAAAAAGGCCTTCTTTTCCACCAACCCATTCTCTCATCCAACCAAAACCACATCAATCATTTGAAACAAACCCTTTCAACCACACTCTCCTTCTTCCCTCCCTTAACAGGCCGTCTCATAATCACACACCACAACGACCAAAACAACAACAACGCTTCATGTTCCATCATTTGCAACAACGTTGGTGCTCTCTTCGTTCACGCTAAAGCAGAAAACACAACCGTTTCCGACATCCTTCAACCCAACTACGTACCTCCCTTTGTTCACTCCTTTTTCCCACTTAACGGCGTTAAAAACCACGAGTCCACATCACAGCCGATTCTAGCAGTCCAAGTAACGGAGTTAAGTGACGGAATCTTCATTGCTTTCACTGTCAACCACGTTGTTTCCGACGGTAAGTCGTTTTGGCATTTCGTCAACTCTTGGTCACAGATCTCAAATGGTTCTCAGAAAATAACTAAACTACCTTCACTTCAACGATGGTTTCCAAACGACGTTGAACTTCCAATACGCTTCCCTTTCACAAAAACAGAATCACAAAAGAAAAACAGTTTTAGAATGTTACCAGAAAGAATCTTTCATTTCACCAAGGAGAAAATAGCAGAACTGAAATCAAAAGCAAACGTAGAAGCAAACAACCAAACAGATGAAACTAAAATATCTTCACTTCAAGCGGTACTATCTCACATTTGGCCTCGCGTTGTTCGTTGCAAACAACCCGATCCACAAGAAGTTTTTCGCTATATGGTAATCATAGGTGCTAGACCTAGGATGGTTCCTCCGCTTGACGATGATTATTTTGGAAATGCTGCTGTATTTGATGGTGTGGAGATGAAAGCCGAGGAAATTCTAGAGGGTGGAATCGGAAAAATTGGTTTGGAGATGAACAAGATGATTAGGTTACATTGTGATGAGAAAATAAGGAAGAATTATGAGTGTTGGTTGAGAGTGCCGAGGTTGATAGAGGTTGGTGCTGTGGCAAATGGTAACTCATTGGCAACAAGTAGTTCTCCGAGGTTTGATGTTTATGGTAATGATTTTGGTTGGGGGAAGCCTGTGGCGGTTAGAAGTGGGGGTGCGAATAAGCCTAATGGGAAGATTACTGTGTTTGCTGGAGCTGAAGAAGGTAGTATTGATGTTGAAATTTGTCTTTCTTACGAGATTTTGGAAGCTTTGGGAAATGATACCGATTTTGTGGTTCCTAATTCTAAGTAA 1350 0.4178 MDSVKVISTSTIQAPVHNNGNSTQNQNQTIELTPWDLQFLPLETIQKGLLFHQPILSSNQNHINHLKQTLSTTLSFFPPLTGRLIITHHNDQNNNNASCSIICNNVGALFVHAKAENTTVSDILQPNYVPPFVHSFFPLNGVKNHESTSQPILAVQVTELSDGIFIAFTVNHVVSDGKSFWHFVNSWSQISNGSQKITKLPSLQRWFPNDVELPIRFPFTKTESQKKNSFRMLPERIFHFTKEKIAELKSKANVEANNQTDETKISSLQAVLSHIWPRVVRCKQPDPQEVFRYMVIIGARPRMVPPLDDDYFGNAAVFDGVEMKAEEILEGGIGKIGLEMNKMIRLHCDEKIRKNYECWLRVPRLIEVGAVANGNSLATSSSPRFDVYGNDFGWGKPVAVRSGGANKPNGKITVFAGAEEGSIDVEICLSYEILEALGNDTDFVVPNSK 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02842 449 Gene3D - 2 215 IPR023213 -
Vivi1g02842 449 MobiDBLite consensus disorder prediction 1 26 - -
Vivi1g02842 449 Pfam Transferase family 22 440 - -
Vivi1g02842 449 Gene3D - 219 439 IPR023213 -
Vivi1g02842 449 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 8 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02842 Vivi-Chr1 61860927 61862826 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02842 49 432 Monolignol Biosynthesis Gene Families AT5G48930 25.495 7.76e-23 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02842 - - gmx:100500257 540.806