Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02841 ATGGCTTCCATCAAACTCATATCAACCACTACAATTCAAGCACCAACTCACATACCTCAAAAAATCCATTTAACCCCATGGGATCTCTCATCTCTCCAAGTTGAAATGAACCAAAAAGGACTTCTCTTTCACAATCCTCAAAACCCAAACGACACATCAAACCAAATCCAACATCTCAAAAACTCACTTTCCTCAACTCTTGCTTTCTTCCCACCTCTCTCAGGTCGTCTCATCATCGATAATCACGGCGACGACAACAACAACAACAACGCCTCGTGTTTCATCCTTTGCAACAACCTTGGTGCATTATTTATCCATGCAAAAGCTGAAAACATAAGTGTCTCCGACACTCTTAAACCAAACTATGTTCCTCCCATTGTTCACTCTTTTTTTCCATTGAATAAAGTCAAAAACTATGAAGGCACATCAAAACCATTGCTTGCTGTACAAGTTACCGAGCTTGTTGATGGTATCTTCATTGGCTTCTCAATCAATCATGCCGTTGTGGACGGTAAGTCCTTTTGGCATTTCATCAATTCATGGTCTGAAATCTCACGTGGTTTCGATCAACCATCGAAACTCCCTACGCTTAATCGTTGGTTTCTCGATGACTCGATTGAAATTCCCATTAAATTTCCATTTAAAATAGAGGAAAATCTAAAAAATACTGAAATTGATGAAAACTCTCTTCCACTTGAGAGGATTTTTCATTTTACAAAGGAGAAAATTGCAAAACTCAAATCAAAGGCTAATGAAGAGGCTAATACAGACAAAATATCTTCTCTGCAAGCACTTTTAACTCATATCTGGCGAGCTGTGATTCGTTGTCACAACATCGACCTTGAAGAAGAAATCATGTATTTTTTAGTCATCGATGCTCGAAGCCGAGTTGTTCCGCAGTTGTCAGAGAATTACTTTGGAAATGTGTTGCAGGTTGGTGGTGTAAAAGTGAAAGCAAAGGAGTTACTTGTTGAAGGAGGGTTTGGAAAAGTTGCTTTTGAGATGAACAAGATGATAGGTTCATACAATGGTGATACTTTGAAGAGAAACTATGAAAATTGGGTGAAAAATCCAAGCTTGTTTCAAGGAAGGCTTAGTAATGTTAAGGCTTTGGCAACAAGTAGTTCTCCAAGGTTTGATGTTTATGGTAATGATTTTGGTTGGGGTAAGCCTGTGGGTGTTAGAAGTGGGGGTGCAAATAAAAGTGATGGAACTATTACTATGTTTTGTGGGGAAGAAGAAGGGAGTATTGATGTTGAAGTTTGTCTTTCTTATGATGTTTTGGAAGCTATGGGAAATGATCCTCAATTCATAAATATCTTTTAA 1326 0.3824 MASIKLISTTTIQAPTHIPQKIHLTPWDLSSLQVEMNQKGLLFHNPQNPNDTSNQIQHLKNSLSSTLAFFPPLSGRLIIDNHGDDNNNNNASCFILCNNLGALFIHAKAENISVSDTLKPNYVPPIVHSFFPLNKVKNYEGTSKPLLAVQVTELVDGIFIGFSINHAVVDGKSFWHFINSWSEISRGFDQPSKLPTLNRWFLDDSIEIPIKFPFKIEENLKNTEIDENSLPLERIFHFTKEKIAKLKSKANEEANTDKISSLQALLTHIWRAVIRCHNIDLEEEIMYFLVIDARSRVVPQLSENYFGNVLQVGGVKVKAKELLVEGGFGKVAFEMNKMIGSYNGDTLKRNYENWVKNPSLFQGRLSNVKALATSSSPRFDVYGNDFGWGKPVGVRSGGANKSDGTITMFCGEEEGSIDVEVCLSYDVLEAMGNDPQFINIF 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02841 441 Gene3D - 2 206 IPR023213 -
Vivi1g02841 441 Gene3D - 231 433 IPR023213 -
Vivi1g02841 441 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 7 438 - -
Vivi1g02841 441 Pfam Transferase family 3 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02841 Vivi-Chr1 61853200 61854544 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02841 43 423 Monolignol Biosynthesis Gene Families AT5G48930 27.901 1.95e-35 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02841 - - gmx:100500257 496.893