Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02832 ATGCTTCGTTTAATACTATTTCTCTTCACCTTCACACTATCTTCCTCCTCAAACTCAACCCTTCCTCAAGACGCCATTTCCCTACTCTCCTTCAAACAAACCGCCGACCAAACCAACAAACTCCTCTACACACTCAACGAGCCCTACGACTACTGCCAATGGCAAGGCGTCAAATGCGCACAAGGCAGAGTCGTACGCTTCGTCCTCCAAAGCTTCTCTCTAACCGGTTTTTTCCCTCCCAACACCCTAACCCGCCTCGACCAACTCCGAGTCTTGAGCCTCCGTAACAACTCCTTATCCGGACCCATCCCGGATCTCTCACCACTCATCAACCTCAAATCACTCTTCCTCGACCGGAACAACTTCTCCGGTTCGTTTCCTCCTTCCATTCTCTTCCTCCACCGCCTCATTACACTTTCCCTCTCTCATAACAACCTCACCGGTTCACTTCCGGTTCAGTTAACTCTCCTCGACCGTCTCATTTCCCTTCGGCTCGACTCAAACTCATTCACCGGTCCTCTTCCTCCGCTCAACCAAACCGAATTAAAAATATTTAATATCTCCGCCAATAACCTCACCGGTCCGGTTCCTGTCACTGAAACTCTCACACGGTTCAAACCGGCGCTGTTTTCCGAGAACCCGGGTCTTTGCGGTGAGATTATTCATAAACAATGCGGTCATCGTTCTAGATTCTTCGGTTCATCAAACGCCACCGGTTCTTCCTCCGCACCGTTGAGTCAGAGCGAGGAATCGCAAGGTATCGTGGTGGTTCCTTCTTCTTACAAGGAAAATAACCATAAAAAAACCGGTTTGGTTTTCGGGTTAATAGTTGGTATTGCGATTCTCTTAGTTATTACGGTAATTATAATCGGGTTAGTTAGAAAACAGAACACCGGGACAAAATCGAAATCGGAATCCGAACCATCGGCGTCGGAAACTCTACCGGCGGTAGCGGGATTGGAAGTGAGAACCGAAGTGGAAGCCGTTACGAAGGTGAAGATGATGGAGGAAGCGCATAGGAGTGGGAAGTTAGTGTTCTGCTGTGGGGAGGTGCAGGAGTATACGCTGGAGCAGCTGATGAGAGCTTCGGCGGAGCTTTTGGGAAGAGGGAGTGTGGGGACCACTTACAAGGCGGTGATGGATTCGAAGGTGATATTGACGGTGAAGAGGTTGGATGCTGGAAAAAGTGGTGTGACGAGTGGGGAAGATTTTCAGAAGCATATGGAGATTGTGGGGAGACTGCGGCATCCTAATTTGGTTCCTTTGAAGGCTTTCTTTCAAGCGAAAGGAGAGAGGCTTGTTATCTATGATTTTCAACCTAATGGAAGCCTCTTCAATCTTGTTCATGGTTCAAGATCGGCGAGAGCAAAGCCGCTGCATTGGACATCATGCTTAAAAATAGCAGAAGATGTAGCTCATGGACTTGCTTATATACATCAAGTTTCGTCTTTGGTTCATGGCAATTTAAAATCCTCTAATGTTCTTCTTGGAGGAGACTTTGAAGCTTGCATAACAGACTATTGTTTGGCCTTCCTTATAGATTCTTCATTACCCGATGATCCTGATTCTGCAGCCTACAAAGCTCCAGAGGTTCGAAAGTCTTACCGCAGGGTGAGTTCAAAGTCTGATGTGTATGCTTTTGGTGTGCTGCTGTTGGAGCTTTTGACGGGAAAACATCCTTCCAAACACCCTTTCCTTGCGCCAAGGGAATTACAAGATTGGGTTAGAGCAATGAGGGATGATGATTTTAGCGAAGATAACCGGCTAGAAATGCTCACCGAGGTTGCCAGTATTTGCAGTGCGTCTTCACCGGAGCAGAGGCCAGCTATGTGGCAAGTTCTTAAGATGATACAAGGAATAAAGGATAGTATTTCAATGGAGGATACTGAACTCACTGGACTGACATAG 1908 0.4727 MLRLILFLFTFTLSSSSNSTLPQDAISLLSFKQTADQTNKLLYTLNEPYDYCQWQGVKCAQGRVVRFVLQSFSLTGFFPPNTLTRLDQLRVLSLRNNSLSGPIPDLSPLINLKSLFLDRNNFSGSFPPSILFLHRLITLSLSHNNLTGSLPVQLTLLDRLISLRLDSNSFTGPLPPLNQTELKIFNISANNLTGPVPVTETLTRFKPALFSENPGLCGEIIHKQCGHRSRFFGSSNATGSSSAPLSQSEESQGIVVVPSSYKENNHKKTGLVFGLIVGIAILLVITVIIIGLVRKQNTGTKSKSESEPSASETLPAVAGLEVRTEVEAVTKVKMMEEAHRSGKLVFCCGEVQEYTLEQLMRASAELLGRGSVGTTYKAVMDSKVILTVKRLDAGKSGVTSGEDFQKHMEIVGRLRHPNLVPLKAFFQAKGERLVIYDFQPNGSLFNLVHGSRSARAKPLHWTSCLKIAEDVAHGLAYIHQVSSLVHGNLKSSNVLLGGDFEACITDYCLAFLIDSSLPDDPDSAAYKAPEVRKSYRRVSSKSDVYAFGVLLLELLTGKHPSKHPFLAPRELQDWVRAMRDDDFSEDNRLEMLTEVASICSASSPEQRPAMWQVLKMIQGIKDSISMEDTELTGLT 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02832 635 Gene3D Phosphorylase Kinase; domain 1 325 438 - -
Vivi1g02832 635 ProSiteProfiles Protein kinase domain profile. 361 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g02832 635 Gene3D Ribonuclease Inhibitor 22 179 IPR032675 -
Vivi1g02832 635 SUPERFAMILY Protein kinase-like (PK-like) 365 621 IPR011009 -
Vivi1g02832 635 FunFam Probable inactive receptor kinase At5g67200 23 133 - -
Vivi1g02832 635 ProSiteProfiles Leucine-rich repeat profile. 88 110 IPR001611 GO:0005515
Vivi1g02832 635 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 6 622 IPR046959 -
Vivi1g02832 635 SUPERFAMILY L domain-like 20 218 - -
Vivi1g02832 635 Gene3D Transferase(Phosphotransferase) domain 1 440 632 - -
Vivi1g02832 635 Pfam Protein kinase domain 364 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g02832 635 Gene3D Ribonuclease Inhibitor 180 228 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02832 Vivi-Chr1 61383243 61387000 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02832 18 628 Receptor kinase-like Gene Family AT3G50230 53.712 0.0 650
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Vivi1g02832 Pkinase 1.3e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02832 - - gmx:100783086 864.759