Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02824 ATGGCAGTAGAACTCATGACAGGTTACAACACAACCAAAACCTTCACTTCCATAGCCGAACAAAATGCTGTCCAAGAAGCAGCCTCCGGCTTAGAAAGCGTCGAAAAACTCATCCAATTACTCTCCCAAGCACGCCACAAATACCACACCCCTTCATCTTCCTCTTCCTTTTCACCTTCAAACCCCAACACCACCACCACCACCAACGCTTCCATGGAGATTGAAAGAGACTGCAAAGCCGTCGCTGACATCGCTGTCTCCAAATTCAAACGCGTTATTTCACTTCTCGAAAAAACCAGAACCGGTCACGCTCGTTTCAGAAAAGCCCCGTTACCACAACCTTCTGATCAACCAATCTTCAACGCTACCCCTCTTCAACAGATTCCACCGGCGCTACCATCATCAACGACCCTTCACCGTCCTATAATCAAGAGAAACGATTCCTCCAAAACCCTTAATTTTTCGTACTCCTCCGCTGCTAATTCCTTCATTTCTTCACTCACCGGCGAGACAGACATCAAGCAGCAACCGTCGTCTTCTTCGCCGGCCGGGGGTTTTCAGATCACGAATCTGTCTCATGTTTCGTCTGTTGGTAAGCCTCCACTGTCCTCTTCTTCGATGAAAAGAAAGTGTAGCTCTGAAACTTTGGGGTCTGGAAAGTGCGGTAGTTCTTCTAGCCGCTGTCATTGTTCCAAAAAAAGGAAATTAAGATTGAAGAGGGTTGTTAGGGTTCCTGCAATCAGCTTGAAGATGGCTGATATTCCACCAGATGATTATTCCTGGAGAAAATATGGTCAGAAACCTATCAAGGGTTCACCTCATCCAAGAGGATACTACAAGTGCAGTAGTGTGAGAGGATGTCCAGCAAGAAAACATGTAGAGAGAGCACTAGATGATGCATCCATGTTGGTGGTAACCTATGAAGGAGAGCACAACCACTCACTTTCTGCAGCAGATGCAACTAATCTGATTCTAGAGTCATCTTAA 987 0.462 MAVELMTGYNTTKTFTSIAEQNAVQEAASGLESVEKLIQLLSQARHKYHTPSSSSSFSPSNPNTTTTTNASMEIERDCKAVADIAVSKFKRVISLLEKTRTGHARFRKAPLPQPSDQPIFNATPLQQIPPALPSSTTLHRPIIKRNDSSKTLNFSYSSAANSFISSLTGETDIKQQPSSSSPAGGFQITNLSHVSSVGKPPLSSSSMKRKCSSETLGSGKCGSSSSRCHCSKKRKLRLKRVVRVPAISLKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDASMLVVTYEGEHNHSLSAADATNLILESS 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02824 328 Gene3D WRKY domain 242 316 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi1g02824 328 SMART WRKY_cls 255 315 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi1g02824 328 Pfam Plant zinc cluster domain 208 253 IPR018872 -
Vivi1g02824 328 Pfam WRKY DNA -binding domain 257 313 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi1g02824 328 SUPERFAMILY WRKY DNA-binding domain 252 315 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi1g02824 328 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 24 321 IPR044810 GO:0003700
Vivi1g02824 328 FunFam WRKY transcription factor 65 239 316 - -
Vivi1g02824 328 MobiDBLite consensus disorder prediction 197 216 - -
Vivi1g02824 328 ProSiteProfiles WRKY domain profile. 250 316 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi1g02824 328 MobiDBLite consensus disorder prediction 49 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02824 Vivi-Chr1 61252205 61254136 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02824 1 313 WRKY Transcription Factor Family AT2G24570 40.173 2.33e-70 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi1g02824 WRKY 9.4e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02824 - - qsa:O6P43_033850 399.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g02824 1 61252205 61254136 Vivi1g02824 1 61252205 61254136 ECH
Vivi1g02824 1 61252205 61254136 Vivi2g03373 2 138715032 138716508 PCT