Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02813 ATGAACTTCACCACCACCACCATAACAACATCTCTTTCTCTTTCTCTTTTTCTCTTAGTCCTAACATTAACCATTAACCAGTGTTTTTCTCTTACCAACGACGGTGTTTTGTTGCGTTCTTTCAAAGAATCCATACTCAACGACCCTTTGTTCGTGCTTTCGAACTGGAACTATACCGACCAAACACCATGTTCATGGAACGGTGTTTCTTGTTCCATTGTAACAACAACAACAAACACCAAAAATGATACACTGTATCGTGTTACTGGTTTATCGCTACCAAATTCTCAGCTTTTAGGTTTAATTCCCTCCGATCTTGGTTCCATTGAACATCTTCAAATTCTTGATCTTTCTAACAATTCCTTCAACGGGTCTCTTCCTTCTTCGCTTTTTCAAGCAAATTCTCAACTTCGTTTTCTGAATTTTTCTAACAATTTGTTAACAGGAGAAGTTCCAGAGTCTATAACCGAGCTTAAAAGCCTTCAGTTTCTTAACTTTTCCGACAATGCTTTAACCGGAAAACTACCAAACAATCTCCCAAACATGCAAAACTTAACCGTTGCTTCGTTTAAGAACAATTACTTAACCGGTTTTCTTCCTAAAGATTTACGAACTTTACAGATTTTGGATCTGTCTTCCAATTTACTGAACGGGTCATTAACTCAAGATTTCGGCGGTGATTCCATTCGTTACTTGAATATTTCTTACAACAAATTCTCCGGCGAAATTCCGCCGGAGTTTGCTGAGAAAATTCCGAGGAACGCAACGGTTGATCTCTCGTTTAATAATCTCACCGGAGAGATACCGGATTCACCAGTTTTCTTGAATCAGGAAACGAAATCTTTTTCTGGTAACAGAGATTTATGTGGAGAATTGACGAAGAACCCGTGTTCTATTCCTTCTTCTCCTTCTTCTGAACCTAAAGCTTCTTCTCCTGCAATCGCCGCAATGCCGAAGAATTTCGACGATGATTCTCCTCCAACAGATTCCTCGGAGAAGAAACAAAGTGGTTTGAGAAAAGGAACTATCATAGGAATTGTGATAGGAGATTTCGTCGGAATTGGAATTTTAGCTATGGTTTTCATTTACGTATACAAGTTGAAAAGAAAAAAGGATGAAGAGAAGGAACAAAAGAACGAATCTACTATTACAAGAAGCGAGAGTTCATCGTCAAATTCCGAAACCAGAAGGTTCACGAGGTGGTCGTGTTTGAGAAAAAGAACAGAAGATGAAGAGTCCTCGGAAACTCCGAGTTCGTCTGATACTGACGTGGAAGCAGCTTCGAAAAATGTTGAAGGTGGTGAAAATGAGAACAAAACCGGGTCGGGTTCGAATACGAATACGGGTACTCTGGTTATTGTTGATGGTGAAAGAGAGCTTGAAGTTGAAACGTTACTTAAAGCTTCTGCGTATATTTTAGGAGCTACTGGTTCGAGTATAATGTATAAAGCTGTGCTTGAAGATGGAACGTCGTTGGCGGTTCGGAGAATCGGTGAAAGTGGGGTTGAACGGTTCAAGGATTTTGAGAATCAGGTTCGGGTCATAGCGAAACTGGTTCACCCGAATCTGGTTCGGGTTCGTGGTTTTTACTGGGGGCACGATGAGAAACTCATTATCTATGATTTTGTTCCTAATGGTTGTCTCGCCAATGTTCGTTACAGAAAAGTGGGGTCTTCACCTAGCCACTTACCGTGGGAACAACGGCTCAAGATAGCAAAAGGAGTTGCACGTGGGCTAACGTATCTCCACGAGAAGAAGCACGTGCATGGGAATTTGAAGCCAACCAATATTCTATTGGGCAATGACATGGAGCCCAAAATTGGAGACTTTGGGCTTGAGAGAATAGTAACAGGTGACACAAGTTATAAAGCGGGAGGTTCAGCACGTATTTTCGGGAGTAAGAGATCAACAACCTCACGTGATAGTTTTCAAGATGTTACACTTGGGCCTAGCCCAAGCCCGAGCCCGAGCTCGATAGGTGGAGTGTCTCCTTATCATGCACCCGAGTCGCTTAGGAATTTGAAGCCTCATGCAAAGTGGGACGTGTACTCTTTCGGGGTCATGTTTCTTGAGCTTTTAACGGGTAAGATTGTGGTTCTGGATGATATGGGCCAAGGGCCCGCGGTAATGGTCGAGGATAAGAATCGGGCTTTGCGGATGGTTGATGTGGCGATTCGGGCTGATATGGAAGGGAAGGAGGAGGCTTTGTTGGGTTATTTTAAGTTAGGGTATAGTTGTGTGACTAATGTTCCTCAAAAAAGACCACAAATGAAAGAGGTGTTGCAAGTTCTTGAAAAAATACCATCTACATTGTCGTATTGGTCATGA 2328 0.421 MNFTTTTITTSLSLSLFLLVLTLTINQCFSLTNDGVLLRSFKESILNDPLFVLSNWNYTDQTPCSWNGVSCSIVTTTTNTKNDTLYRVTGLSLPNSQLLGLIPSDLGSIEHLQILDLSNNSFNGSLPSSLFQANSQLRFLNFSNNLLTGEVPESITELKSLQFLNFSDNALTGKLPNNLPNMQNLTVASFKNNYLTGFLPKDLRTLQILDLSSNLLNGSLTQDFGGDSIRYLNISYNKFSGEIPPEFAEKIPRNATVDLSFNNLTGEIPDSPVFLNQETKSFSGNRDLCGELTKNPCSIPSSPSSEPKASSPAIAAMPKNFDDDSPPTDSSEKKQSGLRKGTIIGIVIGDFVGIGILAMVFIYVYKLKRKKDEEKEQKNESTITRSESSSSNSETRRFTRWSCLRKRTEDEESSETPSSSDTDVEAASKNVEGGENENKTGSGSNTNTGTLVIVDGERELEVETLLKASAYILGATGSSIMYKAVLEDGTSLAVRRIGESGVERFKDFENQVRVIAKLVHPNLVRVRGFYWGHDEKLIIYDFVPNGCLANVRYRKVGSSPSHLPWEQRLKIAKGVARGLTYLHEKKHVHGNLKPTNILLGNDMEPKIGDFGLERIVTGDTSYKAGGSARIFGSKRSTTSRDSFQDVTLGPSPSPSPSSIGGVSPYHAPESLRNLKPHAKWDVYSFGVMFLELLTGKIVVLDDMGQGPAVMVEDKNRALRMVDVAIRADMEGKEEALLGYFKLGYSCVTNVPQKRPQMKEVLQVLEKIPSTLSYWS 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02813 775 Gene3D Ribonuclease Inhibitor 32 203 IPR032675 -
Vivi1g02813 775 Pfam Leucine rich repeat 111 171 IPR001611 GO:0005515
Vivi1g02813 775 MobiDBLite consensus disorder prediction 633 660 - -
Vivi1g02813 775 MobiDBLite consensus disorder prediction 433 450 - -
Vivi1g02813 775 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 202 768 IPR046959 -
Vivi1g02813 775 Gene3D Ribonuclease Inhibitor 204 299 IPR032675 -
Vivi1g02813 775 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Vivi1g02813 775 ProSiteProfiles Protein kinase domain profile. 467 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g02813 775 MobiDBLite consensus disorder prediction 293 337 - -
Vivi1g02813 775 SUPERFAMILY Protein kinase-like (PK-like) 472 768 IPR011009 -
Vivi1g02813 775 Gene3D Transferase(Phosphotransferase) domain 1 544 772 - -
Vivi1g02813 775 FunFam Os07g0541700 protein 548 633 - -
Vivi1g02813 775 Pfam Protein kinase domain 473 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g02813 775 FunFam Nuclear pore complex protein NUP107 32 201 - -
Vivi1g02813 775 CDD STKc_IRAK 473 767 - -
Vivi1g02813 775 Gene3D Phosphorylase Kinase; domain 1 442 542 - -
Vivi1g02813 775 MobiDBLite consensus disorder prediction 399 414 - -
Vivi1g02813 775 SUPERFAMILY L domain-like 29 290 - -
Vivi1g02813 775 MobiDBLite consensus disorder prediction 383 398 - -
Vivi1g02813 775 MobiDBLite consensus disorder prediction 633 664 - -
Vivi1g02813 775 MobiDBLite consensus disorder prediction 373 450 - -
Vivi1g02813 775 FunFam Leucine-rich repeat receptor-like protein kinase 205 299 - -
Vivi1g02813 775 MobiDBLite consensus disorder prediction 295 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02813 Vivi-Chr1 60870740 60874169 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02813 30 767 Receptor kinase-like Gene Family AT4G37250 59.342 0.0 835
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Vivi1g02813 Pkinase 3.5e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02813 - - gmx:100784503 1085.48