Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02807 ATGGAAGCAGTTTCATATTCAATCCCCTCTCTCAATCTCCACACCCACACCAAAACCACCAAAATCCAATCCCCCAATTTCACTTTCCCCCTTCCTCCATCCCCAATTTCAATCAAACCTCTCTATTCTTCCAAACTCCTCATCCTCCATCACCATAAACTCCGTTGCTCCGCCCAATCCACACACAACCACCACCACCATAATCACAATCACACCGATCACAACCATGACCATGACCATAACCATCACCATCACCATCATAATCATTCACATGACATCGATGACGCTAATCTCACTGGACCTCAAAGAGCGATTATCACTTTCGCCAAAGCCACCAAATGGATTGACCTAGCAAATATTCTGAGAGAGCATTTGCATCTATGCTGTTTCTCAACCGCTTTATTTGTAACCGCTGCTATTTGCCCTCACACTTTACCAAAATCACTCATCAAACCCTTCCAGAACTCTCTCATTCTCGTAGCCTTCCCTTTGGTTGGAGTTTCTGCATCACTTGATGCTTTAATTGAAATAAGTAGTGGAAAAGTGAGCATCCATGTGTTAATGGCAATGGCTGCTTTTGCATCAGTATTCATGGGAAACTCTTTGGAAGGAGGGTTACTACTTGCAATGTTTAATCTTGCACATATAGCTGAAGAGTATTTCACTAGTCGTTCAATGGTTGATGTTAGAGAGTTGAAGGATAATAATCCAGAGTTTGCACTTGTTCTTGATACAAAAGATGATAAACTTCCTAATACATCTGATTTGGCGTACAAGAGGGTTCCCGTGCATGATATAATTGTAGGATCATATGTGCTTGTAGGTGCTGGAGAGTCTGTGCCTGTAGATTGCAAAGTTTTTCAAGGCGGTGCCACCATTACCATTGAGCACTTGACAGGAGAAGTCAAACCTCTGGAGGCCAAAGTTGGAGATAGAGTTCCTGGCGGTGCAAGGAATTTAGATGGGAGAATAATTGTGAAGGTAACAAAGACATGGAAGGAATCAACTCTAAGCAGAATTGTGCAGTTGACTGAAGAAGCTCAGTTGAATAAACCTAAACTTCAAAGGTGGCTGGATGAATTTGGTGAACGTTACAGCAAAGTTGTTGTGGTCTTATCAATTGCTATTGCTGTTCTTGGACCACTTGTATTTAAGTGGCCATTCATCAGTACACCAGCTTGCAGAGGTTCAATTTACAGAGCTTTAGGGCTCATGGTTGCAGCATCACCATGTGCCTTGGCTGTGGCTCCGCTGGCATATGCCATAGCAATCAGCTCCTGTGCAAAAAAGGGCATATTACTCAAAGGTGGACATGTTCTGGACGCGCTAGCTTCATGCCATACCATTGCATTTGATAAAACAGGGACATTAACTACTGGTGGACTTATATTCAAGGCAGTTGAGCCCATTTATGGTCATCAAATTAGAAGAAAGGAATCGAACATTTCTTCCTGCTGCATTCCCACCTGTGAAAAGGAAGCTCTTGCTGTTGCTGCAGCTATGGAAAAGGGCACTACTCACCCCATTGGAAGGGCTGTTGTTGACCATAGTGAAGGGAAAGACCTCCCTTCTGTTTGTGTTGAAAATTTTGAATACTTTCCTGGTAGAGGCCTTACTGCCACTGTTAACAGCATTGAGTCAGCAACTGGAGGTGCTAATCTATTGAAAGCATCCCTTGGGTCTATAGATTTCATCACTTCATTTTGTCAATCTGAAGATGAATCAAAAAAGATCAAGGAAGCTATTAATTCATCTCCTTATGGCAGTGAATTTGTTCATGCTGCCCTTTCAATTAATAAAAAGGTCACTTTGATTCACCTGGAGGATAGGCCTCGTCCAGGGGTTTTTGATGTTATTCAAGAATTGCAAGATGAAGCAAAGCTCCGCGTGATGATGTTAACTGGTGATCATGAATATAGCGCAAGGAGAGTTGCAAGTGCTGTGGGTATCAATGAGTTTCACTGCAACCTAAAGCCTGAAGATAAGCTGAGCCATGTAAAGGATATCTCAAGAGAAATGGGGGGAGGCTTAATTATGGTTGGTGAAGGCATTAATGATGCCCCAGCACTTGCTGCTGCAACTGTTGGGATTGTGCTTGCTCATCGTGCTAGTGCAACTGCTATAGCTGTTGCAGATGTGCTGTTGCTTCGAGAAAATATTTCTGCAGTACCATTTTGTATTGCCAAATCCCGCCAAACAACTTCACTGATTAAGCAAAACGTGGCTCTGGCATTGTCTAGCATATTTGTGGCTTCCCTTCCGTCAGTTTTGGGATTTCTGCCATTGTGGATAACGGTTCTCTTACATGAAGGTGGAACCCTGCTTGTTTGTCTAAATTCCATACGTGCTTTAAATGAACCATCCTGGTCCTGGAAGCATGATATTTTACAGCTGATTGGCGAGGTTAAATCTAGACTACTGTCGGCTTAG 2430 0.4292 MEAVSYSIPSLNLHTHTKTTKIQSPNFTFPLPPSPISIKPLYSSKLLILHHHKLRCSAQSTHNHHHHNHNHTDHNHDHDHNHHHHHHNHSHDIDDANLTGPQRAIITFAKATKWIDLANILREHLHLCCFSTALFVTAAICPHTLPKSLIKPFQNSLILVAFPLVGVSASLDALIEISSGKVSIHVLMAMAAFASVFMGNSLEGGLLLAMFNLAHIAEEYFTSRSMVDVRELKDNNPEFALVLDTKDDKLPNTSDLAYKRVPVHDIIVGSYVLVGAGESVPVDCKVFQGGATITIEHLTGEVKPLEAKVGDRVPGGARNLDGRIIVKVTKTWKESTLSRIVQLTEEAQLNKPKLQRWLDEFGERYSKVVVVLSIAIAVLGPLVFKWPFISTPACRGSIYRALGLMVAASPCALAVAPLAYAIAISSCAKKGILLKGGHVLDALASCHTIAFDKTGTLTTGGLIFKAVEPIYGHQIRRKESNISSCCIPTCEKEALAVAAAMEKGTTHPIGRAVVDHSEGKDLPSVCVENFEYFPGRGLTATVNSIESATGGANLLKASLGSIDFITSFCQSEDESKKIKEAINSSPYGSEFVHAALSINKKVTLIHLEDRPRPGVFDVIQELQDEAKLRVMMLTGDHEYSARRVASAVGINEFHCNLKPEDKLSHVKDISREMGGGLIMVGEGINDAPALAAATVGIVLAHRASATAIAVADVLLLRENISAVPFCIAKSRQTTSLIKQNVALALSSIFVASLPSVLGFLPLWITVLLHEGGTLLVCLNSIRALNEPSWSWKHDILQLIGEVKSRLLSA 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02807 809 PRINTS P-type cation-transporting ATPase superfamily signature 94 108 - -
Vivi1g02807 809 PRINTS P-type cation-transporting ATPase superfamily signature 603 614 - -
Vivi1g02807 809 PRINTS P-type cation-transporting ATPase superfamily signature 704 716 - -
Vivi1g02807 809 PRINTS P-type cation-transporting ATPase superfamily signature 626 636 - -
Vivi1g02807 809 PRINTS P-type cation-transporting ATPase superfamily signature 680 699 - -
Vivi1g02807 809 CDD P-type_ATPase_HM 134 782 - -
Vivi1g02807 809 SUPERFAMILY Calcium ATPase, transduction domain A 258 343 IPR008250 -
Vivi1g02807 809 Gene3D - 461 611 IPR023299 GO:0000166
Vivi1g02807 809 PANTHER PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 36 806 - -
Vivi1g02807 809 SFLD C1.7: P-type atpase like 432 733 - -
Vivi1g02807 809 SUPERFAMILY HAD-like 448 780 IPR036412 -
Vivi1g02807 809 MobiDBLite consensus disorder prediction 58 96 - -
Vivi1g02807 809 NCBIfam heavy metal translocating P-type ATPase 184 782 IPR027256 GO:0006812|GO:0016020|GO:0019829
Vivi1g02807 809 Gene3D - 443 731 IPR023214 -
Vivi1g02807 809 SUPERFAMILY Calcium ATPase, transmembrane domain M 186 765 IPR023298 -
Vivi1g02807 809 Pfam haloacid dehalogenase-like hydrolase 448 693 - -
Vivi1g02807 809 NCBIfam HAD-IC family P-type ATPase 588 760 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vivi1g02807 809 NCBIfam HAD-IC family P-type ATPase 208 473 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vivi1g02807 809 Gene3D - 222 348 - -
Vivi1g02807 809 SFLD p-type atpase 432 733 IPR044492 -
Vivi1g02807 809 ProSitePatterns E1-E2 ATPases phosphorylation site. 452 458 IPR018303 -
Vivi1g02807 809 Pfam E1-E2 ATPase 257 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02807 Vivi-Chr1 60663690 60673070 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02807 101 805 Primary Pumps ATPases AT4G37270 76.028 0.0 1090
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g02807 1 60663690 60673070 Vivi1g02807 1 60663690 60673070 ECH