Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02803 ATGGAAGCAGTTTCATATCCCATCCCCTCTCTCAATCTCCACACCCACACCAAAACCACCAAAATTCAATCCCCTAATTTCACTTTCCCTCTTCCTCCATCCCCAATTTCAATCAAACCTCTCTATTCTTCCAAACTCCTCATCCTCCATCACCATAAACTCCGTTGCTCCGCCCAATCCACACACAACCACCACCACCATAATCACAATCACACCGATCACAACCATGACCATAACCACAACCATAACCATAACCATAACCATCACCATCATCATCACCATCATAATCATTCACATGACATCGATGACGCTAATCTCACCGGACCTCAAAGAGCGGTTATCACTTTCGCCAAAGCCACCAAATGGATCGACCTAGCAAATATTCTGAGAGAGCATTTGCATCTATGCTGTTTCTCAACCGCTTTATTTGTAGCCGCTGCTATTTGCCCCCACACTTTACCAAAATCACTCATCAAACCCTTCCAAAACTCTCTCATTCTCGTAGCCTTCCCTTTGGTTGGAGTTTCTGCATCACTTGATGCTTTAATTGAAATAAGTAGTGGAAAAGTGAGCATCCATGTGTTAATGGCAATGGCTGCTTTTGCATCAGTATTCATGGGAAACTCTTTGGAAGGAGGGTTACTACTTGCAATGTTTAATCTTGCACATATAGCTGAAGAGTATTTCACTAGTCGTTCAATGGTTGATGTTAGAGAGTTGAAGGATAATAATCCAGAGTTTGCACTTGTTCTTGATACAAAAGATGATAAACTTCCTAATACATCTGATTTGGCGTACAAGAGGGTTCCCGTGCATGATATAATTGTAGGATCATATGTGCTTGTAGGTGCTGGAGAGTCTGTGCCTGTAGATTGCAAAGTTTTTCAAGGCGGTGCCACCATTACCATTGAGCACTTGACAGGAGAAGTCAAACCTCTGGAGGCCAAAGTTGGAGATAGAGTTCCTGGCGGTGCAAGGAATTTAGATGGGAGAATAATTGTGAAGGTAACAAAGACATGGAAGGAATCAACTCTAAGCAGAATTGTGCAGTTGACTGAAGAAGCTCAGTTGAATAAACCTAAACTTCAAAGGTGGCTGGATGAATTTGGTGAACGTTACAGCAAAGTTGTTGTGGTCTTATCAATTGCTATTGCTGTTCTTGGACCACTTGTATTTAAGTGGCCATTCATCAGTACACCAGCTTGCAGAGGTTCAATTTACAGAGCTTTAGGGCTCATGGTTGCAGCATCACCATGTGCCTTGGCTGTGGCTCCGCTGGCATATGCCATAGCAATCAGCTCCTGTGCAAAAAAGGGCATATTACTCAAAGGTGGACATGTTCTGGACGCGCTAGCTTCATGCCATACCATTGCATTTGATAAAACAGGGACATTAACTACTGGTGGACTTATATTCAAGGCAGTTGAGCCCATTTATGGTCATCAAATTAGAAGAAAGGAATCGAACATTTCTTCCTGCTGCATTCCCACCTGTGAAAAGGAAGCTCTTGCTGTTGCTGCAGCTATGGAAAAGGGCACTACTCACCCCATTGGAAGGGCTGTTGTTGACCATAGTGAAGGGAAAGACCTCCCTTCTGTTTGTGTTGAAAATTTTGAATACTTTCCTGGTAGAGGCCTTACTGCCACTGTTAACAGCATTGAGTCAGCAACTGGAGGTGCTAATCTATTGAAAGCATCCCTTGGGTCTATAGATTTCATCACTTCATTTTGTCAATCTGAAGATGAATCAAAAAAGATCAAGGAAGCTATTAATTCATCTCCTTATGGCAGTGAATTTGTTCATGCTGCCCTTTCAATTAATAAAAAGGTCACTTTGATTCACCTGGAGGATAGGCCTCGTCCAGGGGTTTTTGATGTTATTCAAGAATTGCAAGATGAAGCAAAGCTCCGCGTGATGATGTTAACTGGTGATCATGAATATAGCGCAAGGAGAGTTGCAAGTGCTGTGGGTATCAATGAGTTTCACTGCAACCTAAAGCCTGAAGATAAGCTGAGCCATGTAAAGGATATCTCAAGAGAAATGGGGGGAGGCTTAATTATGGTTGGTGAAGGCATTAATGATGCCCCAGCACTTGCTGCTGCAACTGTTGGGATTGTGCTTGCTCATCGTGCTAGTGCAACTGCTATAGCTGTTGCAGATGTGCTGTTGCTTCGAGAAAATATTTCTGCAGTACCATTTTGTATTGCCAAATCCCGCCAAACAACTTCACTGATTAAGCAAAACGTGGCTCTGGCATTGTCTAGCATATTTGTGGCTTCCCTTCCGTCAGTTTTGGGATTTCTGCCATTGTGGATAACGGTTCTCTTACATGAAGGTGGAACCCTGCTTGTTTGTCTAAATTCCATACGTGCTTTAAATGAACCATCCTGGTCCTGGAAGCATGATATTTTACAGCTGATTGGCGAGGTTAAATCTAGACTACTGTCGGCTTAG 2454 0.4295 MEAVSYPIPSLNLHTHTKTTKIQSPNFTFPLPPSPISIKPLYSSKLLILHHHKLRCSAQSTHNHHHHNHNHTDHNHDHNHNHNHNHNHHHHHHHHNHSHDIDDANLTGPQRAVITFAKATKWIDLANILREHLHLCCFSTALFVAAAICPHTLPKSLIKPFQNSLILVAFPLVGVSASLDALIEISSGKVSIHVLMAMAAFASVFMGNSLEGGLLLAMFNLAHIAEEYFTSRSMVDVRELKDNNPEFALVLDTKDDKLPNTSDLAYKRVPVHDIIVGSYVLVGAGESVPVDCKVFQGGATITIEHLTGEVKPLEAKVGDRVPGGARNLDGRIIVKVTKTWKESTLSRIVQLTEEAQLNKPKLQRWLDEFGERYSKVVVVLSIAIAVLGPLVFKWPFISTPACRGSIYRALGLMVAASPCALAVAPLAYAIAISSCAKKGILLKGGHVLDALASCHTIAFDKTGTLTTGGLIFKAVEPIYGHQIRRKESNISSCCIPTCEKEALAVAAAMEKGTTHPIGRAVVDHSEGKDLPSVCVENFEYFPGRGLTATVNSIESATGGANLLKASLGSIDFITSFCQSEDESKKIKEAINSSPYGSEFVHAALSINKKVTLIHLEDRPRPGVFDVIQELQDEAKLRVMMLTGDHEYSARRVASAVGINEFHCNLKPEDKLSHVKDISREMGGGLIMVGEGINDAPALAAATVGIVLAHRASATAIAVADVLLLRENISAVPFCIAKSRQTTSLIKQNVALALSSIFVASLPSVLGFLPLWITVLLHEGGTLLVCLNSIRALNEPSWSWKHDILQLIGEVKSRLLSA 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02803 817 PRINTS P-type cation-transporting ATPase superfamily signature 688 707 - -
Vivi1g02803 817 PRINTS P-type cation-transporting ATPase superfamily signature 712 724 - -
Vivi1g02803 817 PRINTS P-type cation-transporting ATPase superfamily signature 102 116 - -
Vivi1g02803 817 PRINTS P-type cation-transporting ATPase superfamily signature 611 622 - -
Vivi1g02803 817 PRINTS P-type cation-transporting ATPase superfamily signature 634 644 - -
Vivi1g02803 817 PANTHER PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 56 814 - -
Vivi1g02803 817 MobiDBLite consensus disorder prediction 57 73 - -
Vivi1g02803 817 Gene3D - 451 739 IPR023214 -
Vivi1g02803 817 SUPERFAMILY Calcium ATPase, transduction domain A 266 351 IPR008250 -
Vivi1g02803 817 ProSitePatterns E1-E2 ATPases phosphorylation site. 460 466 IPR018303 -
Vivi1g02803 817 SFLD Haloacid Dehalogenase 440 741 - -
Vivi1g02803 817 CDD P-type_ATPase_HM 142 790 - -
Vivi1g02803 817 SFLD p-type atpase 440 741 IPR044492 -
Vivi1g02803 817 Gene3D - 230 356 - -
Vivi1g02803 817 SUPERFAMILY HAD-like 456 788 IPR036412 -
Vivi1g02803 817 MobiDBLite consensus disorder prediction 57 104 - -
Vivi1g02803 817 MobiDBLite consensus disorder prediction 81 96 - -
Vivi1g02803 817 NCBIfam HAD-IC family P-type ATPase 216 481 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vivi1g02803 817 NCBIfam HAD-IC family P-type ATPase 596 768 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vivi1g02803 817 Gene3D - 469 619 IPR023299 GO:0000166
Vivi1g02803 817 SUPERFAMILY Calcium ATPase, transmembrane domain M 194 773 IPR023298 -
Vivi1g02803 817 Pfam E1-E2 ATPase 265 438 - -
Vivi1g02803 817 Pfam haloacid dehalogenase-like hydrolase 456 701 - -
Vivi1g02803 817 NCBIfam heavy metal translocating P-type ATPase 192 790 IPR027256 GO:0006812|GO:0016020|GO:0019829
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02803 Vivi-Chr1 60451813 60460978 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02803 109 813 Primary Pumps ATPases AT4G37270 76.170 0.0 1088
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02803 K01534 - gmx:100776309 1314.29