Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02798 ATGGCAATTCAACACTCTTTCATTTTACTTACTTTTCTTCTTCAATTCTCATCATTACAATTCCCCTCACTCGGATTATACAATCTCCAAGACACTTACTTCATCAACTGCGGATCAGATTACGACGTTAAAGAAAATAACAAGCTATATATTGGTGAATCAAATCCTTCTTACCCTAAAAAAATATTCGGCATAAGCTCCACTGTAACTAATCAATCATCAGTACCTTCAACTCTCTACCAAACAGCAAGAATTTTCAATTCTGAATCTTCCTACCAATTCACTACCGTCCCAAACAACACCTACATGGTACGTTTCCATTTCCTTTCCTTCTCTTCGCCTACTAACCTTTCCTCTGCTAAATTCAGCGTTTCTGTTCCCGGTTTCCATCTCTTACAAAATTTTGACGCCAAAAACACCACCAACTCTCCTTTAATAAAAGAGTATTTTGTCAAAATCATCCGAAAAAGATTCAAAATCACTTTCATACCTCAAAACTCATCATTCGCCTTTGTTAATGCAATAGAACTCTTTATGCTCCCTATTCATTTTATCCCCGATTCAGTCGCACGTTTCACTTACATCGGTTCTACTGGTCGAGGCCTATCTACTTTCAGTGACGATTTCCTCTCTCGAGCGTTGGAAACTAAACACCGTCTCAACGTTGGTGGCGAAACTGTCACTAGATTAACCGATAACTTATCGAGAAATTGGTTACCTGATGATAATTATATAACTACTCCACAGAACGCTAAGAATAGTTCCTTTGGCGGTGATTTAAAACGCACTGCAAATGATGAATCTGATGGTCCAAATTCAAATCAATATATAGCTCCAGATAGTGTTTATCAAAATGCCAAAGAGAGTAAAAACGGTTCTGACGGTTTAAACATAAGTTGGAGTGTTCCTGTGGAGAAGAATATTGATCATTTTCTTAGGCTTCACTTTTGTGACTTTTCAAATCTACAGCCTGGTCTTACAACTTTCTTTCTCTACATTTATGACACTTATGTTCAAAATGTAAATGATGATGGCACAGGTATATCACTTCAGTTGAATGATCCTTATTATTATGATTTTGTGGTTCGCTCCGATGGCTCTGGGCTATTGAAGGTTACTGTAACTCCTAATGTGACGGCTTTTGTAGCAAACGCATTTTTAAACGGATTAGAACTAATGAAAGTGATTGAACCATCAGGTTTGATTCCGTTAGATGATTTGGATTCAAATTCAAAGGTTAGTGTTCCTATGGTAGTGGGTTCGGCTGTGGGAGGTTTAGTTCTGGTTTCTGCTGTGGTGGCTGTGTTGCTTTGGATTAGAAAAATCAGGAAACAAAGGCCTGTTGAGAATTCCAGTTGGTTGCCCGTTCGAGCAGCCGCGGGATGGAGCAATCATAGTAGATTAACTGATGGAACAACAACTCAAGGCTCACCTCTGCCTAACATAAATCTTGGATTGAAAATCTCCTTGCTTGATATTCAACTTGCAACGGAGAATTTCAAAGCAGAGAGGATAATTGGAAAGGGTGGTTTTGGAAATGTTTATAAGGGAGTTCTCAAGGATGGAAAGAGTGTGGCAGTGAAAAGAAGTGAACCAGGATCAGGTCAAGGACTTCCTGAATTTCAAGCAGAGATAATGGTTTTGTCCAAAATTCGTCACAGGCACCTTGTTTCCTTAATAGGGTATTGTGATGAAAGGTTTGAGATGATACTTGTTTATGAGTACATGGAAAAAGGGACACTTAGAGACGTTTTGTACAACACAAATTTGTCTAGTTTTTTAAGTTGGAAGCAAAGGCTTGAGATTTGTATCGGTGCTGCTAGAGGTCTTCATTATCTACACAAAGGTGCTACTGGTGGAATAATTCACCGCGATGTGAAATCCACAAACATATTGCTTGATGAGAATCTTGTTGCCAAAGTTGCTGATTTTGGTCTTTCAAGAACTGGTCCTCTTGATCAGCATTCTTATGTCAGTACAGGTGTTAAAGGAACATTTGGGTATCTCGATCCAGAGTACTTTAGATCACAACAGCTAACAGAAAAATCTGATGTTTATTCATTCGGCGTGGTTCTACTTGAAGTGCTGTGTGCAAGACCGGCCCTTGATCCTGCGCTTCCAAGGGAACAGGTGAACTTGGCTGAGTGGGGTGTTTTTTGCAAAGAAAAAGGAATATTGGAAGATATTATTGATCCTACCATTAAGGGGCAGATTGATCAAAACTCACTAAGAAAATTTAGTGAGACAGTGGAAAAATGCTTACAAGATGATGGCAGTGATAGGCCTTCGATGGGTGATGTATTGTGGGACTTGGAATATGCTTTGCAGCTTCAGAGAGGTACAATAATTAGAGAACCTCATGAGGATAGTTCTAGCAGTGCTTCTGTATCAATTCAATTGCCTAATGTTCGCCATTTTCCTTCTTTGTCTACACTGAGTGAAACGGATGACATGTCTATTGGGAGGATTACTGATGAATCAGTTAATGCAGAGGATTCTGTTTTCTCTCAGTTGAATATTGGTGATGCTAGATAG 2535 0.3909 MAIQHSFILLTFLLQFSSLQFPSLGLYNLQDTYFINCGSDYDVKENNKLYIGESNPSYPKKIFGISSTVTNQSSVPSTLYQTARIFNSESSYQFTTVPNNTYMVRFHFLSFSSPTNLSSAKFSVSVPGFHLLQNFDAKNTTNSPLIKEYFVKIIRKRFKITFIPQNSSFAFVNAIELFMLPIHFIPDSVARFTYIGSTGRGLSTFSDDFLSRALETKHRLNVGGETVTRLTDNLSRNWLPDDNYITTPQNAKNSSFGGDLKRTANDESDGPNSNQYIAPDSVYQNAKESKNGSDGLNISWSVPVEKNIDHFLRLHFCDFSNLQPGLTTFFLYIYDTYVQNVNDDGTGISLQLNDPYYYDFVVRSDGSGLLKVTVTPNVTAFVANAFLNGLELMKVIEPSGLIPLDDLDSNSKVSVPMVVGSAVGGLVLVSAVVAVLLWIRKIRKQRPVENSSWLPVRAAAGWSNHSRLTDGTTTQGSPLPNINLGLKISLLDIQLATENFKAERIIGKGGFGNVYKGVLKDGKSVAVKRSEPGSGQGLPEFQAEIMVLSKIRHRHLVSLIGYCDERFEMILVYEYMEKGTLRDVLYNTNLSSFLSWKQRLEICIGAARGLHYLHKGATGGIIHRDVKSTNILLDENLVAKVADFGLSRTGPLDQHSYVSTGVKGTFGYLDPEYFRSQQLTEKSDVYSFGVVLLEVLCARPALDPALPREQVNLAEWGVFCKEKGILEDIIDPTIKGQIDQNSLRKFSETVEKCLQDDGSDRPSMGDVLWDLEYALQLQRGTIIREPHEDSSSSASVSIQLPNVRHFPSLSTLSETDDMSIGRITDESVNAEDSVFSQLNIGDAR 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02798 844 FunFam receptor-like protein kinase FERONIA 465 575 - -
Vivi1g02798 844 Pfam Protein tyrosine and serine/threonine kinase 501 768 IPR001245 GO:0004672|GO:0006468
Vivi1g02798 844 ProSitePatterns Protein kinases ATP-binding region signature. 506 528 IPR017441 GO:0005524
Vivi1g02798 844 ProSitePatterns Serine/Threonine protein kinases active-site signature. 621 633 IPR008271 GO:0004672|GO:0006468
Vivi1g02798 844 Gene3D - 30 180 - -
Vivi1g02798 844 Gene3D - 213 396 - -
Vivi1g02798 844 Pfam Malectin-like domain 35 395 IPR024788 -
Vivi1g02798 844 FunFam Receptor-like protein kinase FERONIA 576 793 - -
Vivi1g02798 844 Gene3D Phosphorylase Kinase; domain 1 464 575 - -
Vivi1g02798 844 PANTHER OS07G0166700 PROTEIN 487 778 IPR045272 GO:0004714|GO:0006468
Vivi1g02798 844 SUPERFAMILY Protein kinase-like (PK-like) 489 808 IPR011009 -
Vivi1g02798 844 CDD STKc_IRAK 506 772 - -
Vivi1g02798 844 SMART serkin_6 500 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g02798 844 MobiDBLite consensus disorder prediction 245 278 - -
Vivi1g02798 844 ProSiteProfiles Protein kinase domain profile. 500 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g02798 844 FunFam Putative receptor-like protein kinase 212 396 - -
Vivi1g02798 844 Gene3D Transferase(Phosphotransferase) domain 1 576 792 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02798 Vivi-Chr1 60243051 60246085 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02798 7 844 Receptor kinase-like Gene Family AT2G23200 44.084 0.0 627
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Vivi1g02798 Malectin_like 1.4e-29 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02798 - - mtr:25493508 1249.19