Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02796 ATGCCTATGGCAATTCAACACTATATTATTTTACTCAGTTTTCTTCTTCAATTCTCATTACTACAATTTCCCTCACTCGGATTATACAATCTCCAACACACTTACTTCATCAACTGTGGATCAGATATCAATGTTAAAGAAAACAACAATCTTTATATTGGTGAATCAAATTCTACTTACCCTAAAACAATATTCACCAAAAGCTCCACAGAAACAAGCCAATCATCAGTTCTGTCACCTCTCTACCAAACAGCTAGAATTTTCCATTCTGAATCATCCTATGAGTTCAATACCATCCCAAACAACACCTACATGGTACGTTTCCATTTCCTTTCCTTCTCTTCATCAACTAACCTTTCCTCTGCTAAATTCAATGTTTCTGTTCCTGGATTTTATCTGTTACAAAATTTCGACGCAAAAAACACCACCAACACTCCTTTAATAAAAGAGTATTTTGTCAAAATCATAAGAAAAAGATTCAAAATAACTTTCACACCTCAAACCTCATCATTTGCGTTTGTTAATGCAATAGAACTCTTTATGCTTCCTATTCATTTTATCCCCGATTCAATCGCACGTTTCAATTACATCGGTTCTACTACTGGTCGAGGCCTATCTACTTATACTGGCAGTTTACTCTCTCGAGCTTTGGAAACCAAACACCGTCTTAATGTAGGAGGCGAAACTGTCACTAGACTAACCGATAACTTATCGAGAAATTGGTTACCGGATAACAGTTATATAACTACTCCACAAAACGCTTACGATGGCAACTTTAACGGGGATATCAAACGCTCGGCAGACGATGAATCTGACGGTCCAAATTCAAATCAATATATTGCTCCAGATATTGTTTATCAAAATGCCAAAGAGAGTAAAAACGGTTCTAACGGATTAAGCATAAGTTGGAGTGTTCCTGTGGAGAAAAACATTGATCATTTTCTTAGGCTTCACTTTTGTGACCTTTTAAATCCACAGCCTGGTCTTACAACTTTCTTTCTCTACATTTATGACACTTATGTTCAAAATGTAAATGATGGCGTAGGTTTGTTATTTGAGTTGCGTGATCCTTATTATTATGATTATGTGGTTCGCTCCGATAGCTCTGGCGTATTGAAGGTTACGGTAACACCTAATAAGACAGATTTTAAACCAAACGCATTTTTAAATGGGCTAGAACTAATGAAAGTGATTGAGTCGTCAGGTTTAGTTCCTGCAGATTATTTCGATTCAAAATCGAAGGTCAGACTTCCAGTGTTGGTGGGTTCAGTCATTGGGGGTTTGGTTTTAGTTTCTGTTATCGCCGTTGTGTATCTTTGTAAAATAAGGAAACAAACGCCTGATGAGAATTCCAATTGGTTGCCAGTTCGAGCTGTTGCGGGAGGAAGTTCTCACAGTAGACTAACTGATGGAACAACTCAAGGCTCACCTCTACCTAACATAAATCTTGGATTGAAAATCTCCTTGCTTGATCTTCAACTTGCAACGGAGAATTTTGATGCGAAGTGGATAATTGGAAAAGGTGGTTTTGGAATTGTTTATAGAGGAGTTCTCGGGAATGGAAAGATTGTGGCTGTGAAAAGAAGTGAACCAGGATGTGGTCAAGGACTTCAAGAATTTCAAGCTGAGATAATGGTTTTGTCCAAAATTCGTCACCGACACCTTGTTTCCTTAATTGGATATTGTGACGAGAGGAATGAGATGATTCTTGTGTATGAGTACATGGAAAAAGGGACACTTAGAGACAGTTTGTACAATACAAATTTGCCTAATTTTTTGAGTTGGAAGCAAAGGCTTGAGATTTGTATTGGTGCTGCTAGAGGTATTCATTACCTTCACAAAGGAGCAACTGGTGGAATCATTCACCGGGATGTGAAATCCACAAACATATTGCTTGATGAGAATCTTGTTGCTAAAGTTGCTGATTTTGGTCTTTCAAGGACGGGTCCTCTTGATCAGCATTCTTATGTCAGCACAGGTGTTAAAGGAACTTTCGGGTATCTTGACCCAGAATACTTTAGATCACAACAGCTTACAGAAAAATCTGATGTTTATTCATTCGGCGTGGTTCTACTAGAAGTGCTGTGTGCAAGACCAGCCATTGAACCGGCGCTTCCAAGGGAACAGGTGAACTTGGCTGAGTGGGGAGTTTTTTGCAAAGACAAAGGGATATTGGAAGATATTATTGATCCATCCATTAAAGGACATGTTGATCAAAACTCACTAAGAAAATTTAGTGAGATAGTGGAAAAATGCTTACAAGATGATGGTAGTGATAGGCCTTCAATGGGTGATGTGCTATGGGACTTGGAATATGCTTTGCAGCTTCAGAGAGGTGCAATACATAGACAGCCTCACGAGGATAGTTCCAACAGTGCTTTTGTATCAATTCAATTGCCTAATGTTCGCCGTTTTCCTTCGCTGTCAACACTAAGTGAAACGGATGACATGTCTATTGGGAGGGTTACTGATGAATCTGATACTGCAGCAGATACTGTTTTCTCTCAGTTGAAAATTGGTGACGGTAGATAG 2532 0.387 MPMAIQHYIILLSFLLQFSLLQFPSLGLYNLQHTYFINCGSDINVKENNNLYIGESNSTYPKTIFTKSSTETSQSSVLSPLYQTARIFHSESSYEFNTIPNNTYMVRFHFLSFSSSTNLSSAKFNVSVPGFYLLQNFDAKNTTNTPLIKEYFVKIIRKRFKITFTPQTSSFAFVNAIELFMLPIHFIPDSIARFNYIGSTTGRGLSTYTGSLLSRALETKHRLNVGGETVTRLTDNLSRNWLPDNSYITTPQNAYDGNFNGDIKRSADDESDGPNSNQYIAPDIVYQNAKESKNGSNGLSISWSVPVEKNIDHFLRLHFCDLLNPQPGLTTFFLYIYDTYVQNVNDGVGLLFELRDPYYYDYVVRSDSSGVLKVTVTPNKTDFKPNAFLNGLELMKVIESSGLVPADYFDSKSKVRLPVLVGSVIGGLVLVSVIAVVYLCKIRKQTPDENSNWLPVRAVAGGSSHSRLTDGTTQGSPLPNINLGLKISLLDLQLATENFDAKWIIGKGGFGIVYRGVLGNGKIVAVKRSEPGCGQGLQEFQAEIMVLSKIRHRHLVSLIGYCDERNEMILVYEYMEKGTLRDSLYNTNLPNFLSWKQRLEICIGAARGIHYLHKGATGGIIHRDVKSTNILLDENLVAKVADFGLSRTGPLDQHSYVSTGVKGTFGYLDPEYFRSQQLTEKSDVYSFGVVLLEVLCARPAIEPALPREQVNLAEWGVFCKDKGILEDIIDPSIKGHVDQNSLRKFSEIVEKCLQDDGSDRPSMGDVLWDLEYALQLQRGAIHRQPHEDSSNSAFVSIQLPNVRRFPSLSTLSETDDMSIGRVTDESDTAADTVFSQLKIGDGR 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02796 843 MobiDBLite consensus disorder prediction 259 279 - -
Vivi1g02796 843 Pfam Malectin-like domain 37 397 IPR024788 -
Vivi1g02796 843 Gene3D Phosphorylase Kinase; domain 1 467 574 - -
Vivi1g02796 843 SMART serkin_6 499 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g02796 843 SUPERFAMILY Protein kinase-like (PK-like) 478 771 IPR011009 -
Vivi1g02796 843 ProSitePatterns Protein kinases ATP-binding region signature. 505 527 IPR017441 GO:0005524
Vivi1g02796 843 PANTHER OS07G0166700 PROTEIN 486 777 IPR045272 GO:0004714|GO:0006468
Vivi1g02796 843 Gene3D Transferase(Phosphotransferase) domain 1 575 794 - -
Vivi1g02796 843 FunFam Receptor-like protein kinase FERONIA 575 792 - -
Vivi1g02796 843 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Vivi1g02796 843 Pfam Protein tyrosine and serine/threonine kinase 504 767 IPR001245 GO:0004672|GO:0006468
Vivi1g02796 843 ProSiteProfiles Protein kinase domain profile. 499 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g02796 843 FunFam receptor-like protein kinase FERONIA 464 574 - -
Vivi1g02796 843 CDD STKc_IRAK 505 771 - -
Vivi1g02796 843 Gene3D - 31 182 - -
Vivi1g02796 843 Gene3D - 216 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02796 Vivi-Chr1 60198996 60202411 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02796 14 843 Receptor kinase-like Gene Family AT2G23200 43.137 0.0 615
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Vivi1g02796 Malectin_like 6.3e-29 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02796 - - mtr:25493508 1204.5