Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02794 ATGGCAATTCAACACTCTTTCATTTTACTTACTTTTCTTCTTCAATTTTCATCACTGCAATTTCCCTCACTCGGACTATACAATATCCAAGACACTTACTTCATCAACTGTGGATCAGATATCAATGTTAAAGAAAATAACAAGCTCTATATTGGTGAATCAAATTCTACTTACCCTAAAACATTATTCGACATAAGCTTTACAGAAACAAGCCAATCATTAGTGCCTTCACCTCTCTACCAAACAGCAAGAATTTTCCATTCTGAATCTTCTTACGAGTTTACTACAGTCCCAAACAACACCTACATGGTACGTTTTCATTTCCTTTCATTCTCTTCACCAACTAATCTTTCCACTGCTCAATTCAATGTTTCCGTTCCCGGTTTCTCTCTCTTACAAAATTTTGATGCCAAAAACTTCACTTACTCCCCTTTAATAAAAGAGTATTTTGTCAAAATCATCCGAAAAAGATTCAAAATAACTTTCACACCTCAAAACTCATCATTCGCCTTTGTTAATGCAATAGAACTCTTTATGCTCCCTATTCATTTTATCTCCGATTCAGTAGTGCGTTTCAATTACATCGGTTCTACAGGTCGAGGCCTATCTACTTATAGTGGCAATTTACTCTCTCGAGCGTTGGAAACTAAACACCGTCTTAACATTGGTGCTGAAACTGTCACTAGATTAACCGATAACTTATCGAGAGAGTGGTTACCAGATGATAATTATATAACTACTCCACAGAACGCTACGAATAGTTCCTTTAGTGGTGATATAAAACGCACAGCAAATGATGAATCTGATGGTCCAAATTCAAATCAATATATTGCTCCAGATATTATTTATCAATTTGCCAAAGAGAGTAAAAACGGTTCTAACGGTTTAAGCATAAGTTGGAGTGTTCCTGTGGAGAAGAATATTGATCATTTCATTAGGCTTCACTTTTGTGACTTTTCAAATCAACAGCCTGGTCTTACCACTTTCTTTCTCTATATTTATGACACTTATGTTCAAAATGTAAATGATAATGGCCCAGGTATATCACTTGAGTTGAATGATCCTTATTATTATGATTTTGTGGTTCGCTCCGATGGCTCTGGGCTATTGAAGGTTACTGTAACACCTAATGTGACGGTTTCTTTACCAAACGCATTTTTAAACGGCCTAGAACTAATGAAAGTGATTGAACCATCAGGTTTGATTCCGTTAGATGATTTGGATTCAAATTCAAAGGTTAGTAGTCTTCCCGTGGTGGTGGGTTCGGTTGTTGGAGGTTTAGTTCTGGTTTCTGTTCTGGTGTTTGCGTTTCTTTGGATTGGTAAAATAAGGAAACAAAGACTTCCCGATAATTCTGATTTGTTGGCGATTCCAGCTGCTGCAGGAGCGATTTCTCATAGAAGATTAACTTATGGAAAAACAACTCAAGGTTCACCTTTAGCTAACATAAATCTTGGCCTGAAAATTTCATTGCTTGATCTTCAATTAGCAACGGAGAATTTTGATGCGAAGAGGATAATAGGAAAAGGTGGTTTTGGAAATGTTTATAAAGGAGTTCTCAAGAATAGAATGAATGTTGCAGTGAAACGAAGTGTGTCGGGATCAGGCCAAGGGCTTCTTGAATTTGAAACTGAGATAATGGTTTTGTCCAAGATTCGACACATACACCTTGTTTCCTTAATTGGGTATTGTGATGAAAGCGGTGAGATGATACTTGTTTATGAGTATATGAAAAAGGGGACACTTAGAGAGAATCTGTACAATACAAATTTGCCTAGTTTTCTTACTTGGAAGCAAAGGCTTGAGATTTGTATTGGTGCTGCTAAAGGTCTTCATTACCTTCACAAAGGAGTGGCTGGTGGAATAATCCATCGCGATGTGAAATCCACAAACATATTGCTTGATGAGAATCTTGTTGCTAAACTTGCTGATTTTGGTCTTTCAAAGACAGGTCCTATTGATCAAGAATCTTATGTCGGCACATGTGTTAAAGGAACCTTTGGATATCTTGATCCTGATTACTTCAAATCACTCAAGCTTACAGAAAAATCTGATGTTTATTCTTTTGGGGTTGTTCTACTTGAAGTGTTGTGTGCAAGACCAGCCATCGATCAATCTTGTCCAAGTGGGCAAGTCAATTTGGTCGAGTGGAGATTGGGTTGCAAAGACAACGGGATACTTGAAGAGATTGTTGATCCTTCCATAAAAGAGCAAATTGATGAAAACTCGCTTAGAGTATTTAGCGAGACAGTGGAAAAATGCGTGCAGGAAAATGGTAGTGATAGACCAACAATGCGTGATGTGTTGTGGAACTTGGAATATTCTTTGCAGCTTCAGTTAGAACAACACAAGGATAGTTCTAGCATTGGTTTAACATTACTTCAATTTTCTAATATTCAACGTTTACTTTCTCTGTCTACACTGGTCGAAGTGGACGGCATGTCTATTGGGAAGGTTGATGAATCTGAAAGTGCAGCGTTGATGATGCTAGATAACATTTCGTGCGAAGCAAATCAAGGCACAACGATCAACTCGTGTGTGTCTCCATAA 2550 0.3757 MAIQHSFILLTFLLQFSSLQFPSLGLYNIQDTYFINCGSDINVKENNKLYIGESNSTYPKTLFDISFTETSQSLVPSPLYQTARIFHSESSYEFTTVPNNTYMVRFHFLSFSSPTNLSTAQFNVSVPGFSLLQNFDAKNFTYSPLIKEYFVKIIRKRFKITFTPQNSSFAFVNAIELFMLPIHFISDSVVRFNYIGSTGRGLSTYSGNLLSRALETKHRLNIGAETVTRLTDNLSREWLPDDNYITTPQNATNSSFSGDIKRTANDESDGPNSNQYIAPDIIYQFAKESKNGSNGLSISWSVPVEKNIDHFIRLHFCDFSNQQPGLTTFFLYIYDTYVQNVNDNGPGISLELNDPYYYDFVVRSDGSGLLKVTVTPNVTVSLPNAFLNGLELMKVIEPSGLIPLDDLDSNSKVSSLPVVVGSVVGGLVLVSVLVFAFLWIGKIRKQRLPDNSDLLAIPAAAGAISHRRLTYGKTTQGSPLANINLGLKISLLDLQLATENFDAKRIIGKGGFGNVYKGVLKNRMNVAVKRSVSGSGQGLLEFETEIMVLSKIRHIHLVSLIGYCDESGEMILVYEYMKKGTLRENLYNTNLPSFLTWKQRLEICIGAAKGLHYLHKGVAGGIIHRDVKSTNILLDENLVAKLADFGLSKTGPIDQESYVGTCVKGTFGYLDPDYFKSLKLTEKSDVYSFGVVLLEVLCARPAIDQSCPSGQVNLVEWRLGCKDNGILEEIVDPSIKEQIDENSLRVFSETVEKCVQENGSDRPTMRDVLWNLEYSLQLQLEQHKDSSSIGLTLLQFSNIQRLLSLSTLVEVDGMSIGKVDESESAALMMLDNISCEANQGTTINSCVSP 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02794 849 CDD STKc_IRAK 507 773 - -
Vivi1g02794 849 FunFam Receptor-like protein kinase FERONIA 577 790 - -
Vivi1g02794 849 MobiDBLite consensus disorder prediction 249 273 - -
Vivi1g02794 849 Gene3D Transferase(Phosphotransferase) domain 1 577 792 - -
Vivi1g02794 849 SMART serkin_6 501 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g02794 849 Gene3D - 213 396 - -
Vivi1g02794 849 Gene3D - 30 180 - -
Vivi1g02794 849 Gene3D Phosphorylase Kinase; domain 1 463 576 - -
Vivi1g02794 849 Pfam Protein tyrosine and serine/threonine kinase 504 770 IPR001245 GO:0004672|GO:0006468
Vivi1g02794 849 ProSitePatterns Protein kinases ATP-binding region signature. 507 529 IPR017441 GO:0005524
Vivi1g02794 849 SUPERFAMILY Protein kinase-like (PK-like) 489 770 IPR011009 -
Vivi1g02794 849 PANTHER OS07G0166700 PROTEIN 488 779 IPR045272 GO:0004714|GO:0006468
Vivi1g02794 849 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
Vivi1g02794 849 ProSiteProfiles Protein kinase domain profile. 501 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g02794 849 Pfam Malectin-like domain 35 395 IPR024788 -
Vivi1g02794 849 FunFam receptor-like protein kinase FERONIA 466 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02794 Vivi-Chr1 60185933 60189106 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02794 7 788 Receptor kinase-like Gene Family AT2G23200 42.236 0.0 567
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Vivi1g02794 Malectin_like 1.1e-26 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02794 - - mtr:25493508 1104.35