Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02793 ATGTATTACATCATTCTTGCTGTTATTTCTCTTATAACACTAAAATTTCTCATAATCTCAACAAAAAAACTCAGAAACCTTCCACCAGGTCCACTGAGTATTCCCATAATTGGAAACATTTACCAACTCAAACACCCACTTCACCGCACTCTCCACAATCTCTCACTAAAATACGGTCAAGTCTTTTCCCTACGCTTCGGTTCTCGTTTAGTCGTAGTCGTTTCATCACCTTCCGTCGTACACGAATGTTTCACCAAAAACGACACCGTTTTAGCAAACCGTCCACCTCTTCTCGCCGGAAAACACTTAGGCTACAACTACACCGCCGTTACAGTGGCACCTTACGGCGATCACTGGCGTAACGTTCGCCGCATAATCTCCCTGGAGATCCTTTCATCTCACCGTTTGAATTCCTTTTTAGGAATCAGAAAAGATGAAATCAAGAAACTCATGCAAAAGCTAGCTCGTGATAGTGGAGATAGTTTTGCCAAAGTGGAATTGAAGTCGAGGTTTTCGGAGATGACTTTTAACATGATAATGAGAATGATAGCTGGAAAAAGGTATTATGGAGAGGATTGTTACGTGAGTGATGAGGAAGAAGCCAAGAGATTTAGGGAGGTGATTACCGAGTTTATATCGGTGGGAGGATCGAGTAATCCTAGCGAATTTGTTTGGATTTTTAGGTTGTTTGATTTTGGTAGTTATGAGAAGAGGTTGAAGAGAATTAGTAGAAGATTTGACGGGTTCTTGCAGGGTCTAGTTGATGAACATCGAAGAAAGAAGGAGAATGGGAATACCATGATTGATCATCTCTTGAACTTGCAAAAATCGCAACCAGAGTATTATACTGATCAAATCATCAAAGGGATTGTTCTGGTTATGATCCTTGGAGGAACAGAAACATCAGCTACAACATTAGAATGGGCAATGTCTGCATTACTAAATCATCCAGAAGTGTTGAAGAAGGCTAAAGAAGAAATCGATACCAACATAGGGCAAGATCGCTTAGTAGAAGAATCAGATATTTCAAAACTCCCTTACCTTCAAAACATAATCCACGAGACATTTCGGTTGCATCCCGCATTTGCATTACTGGCGCCCCATTTTTCTTCGGAAGATTGCACCATAGGAGGTTATAATGTTCCAAAGGGTACTATTTTGTTGGTTAATGCTTGGGCAATTCATAGAGATTCTCAGCTATGGAGTGATCCAACACAGTTCAAGCCAGAGAGATTTGAGAAAGAAGGGGAAGCTGAAAAGTTGATACCATTTGGATTGGGAAGAAGGGCTTGTCCAGGAGCAAATTTGGGGCAGCGTACAGTAAGTTTAACATTGGCTCAATGTATTCAATGTTTTGATTGGAAAAGAATAAGTGAGAAAGAAATTGATATGAGTGAAGGAAAAGGGGCCACTACACCGAAGCTAATTCCCTTAGAAGCCATGTGTAAAGCTCGTTTTAATGTCATCAACAAGGTTTTTCTTGAAGCAGATGAAAAGATGTCCATGGAGTAA 1512 0.4041 MYYIILAVISLITLKFLIISTKKLRNLPPGPLSIPIIGNIYQLKHPLHRTLHNLSLKYGQVFSLRFGSRLVVVVSSPSVVHECFTKNDTVLANRPPLLAGKHLGYNYTAVTVAPYGDHWRNVRRIISLEILSSHRLNSFLGIRKDEIKKLMQKLARDSGDSFAKVELKSRFSEMTFNMIMRMIAGKRYYGEDCYVSDEEEAKRFREVITEFISVGGSSNPSEFVWIFRLFDFGSYEKRLKRISRRFDGFLQGLVDEHRRKKENGNTMIDHLLNLQKSQPEYYTDQIIKGIVLVMILGGTETSATTLEWAMSALLNHPEVLKKAKEEIDTNIGQDRLVEESDISKLPYLQNIIHETFRLHPAFALLAPHFSSEDCTIGGYNVPKGTILLVNAWAIHRDSQLWSDPTQFKPERFEKEGEAEKLIPFGLGRRACPGANLGQRTVSLTLAQCIQCFDWKRISEKEIDMSEGKGATTPKLIPLEAMCKARFNVINKVFLEADEKMSME 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02793 503 FunFam Cytochrome P450 family protein 19 488 - -
Vivi1g02793 503 PANTHER CYTOCHROME P450 82C3-RELATED 8 486 - -
Vivi1g02793 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 424 433 IPR017972 GO:0005506|GO:0016705
Vivi1g02793 503 SUPERFAMILY Cytochrome P450 28 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g02793 503 Pfam Cytochrome P450 28 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g02793 503 PRINTS P450 superfamily signature 422 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g02793 503 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g02793 503 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g02793 503 PRINTS P450 superfamily signature 431 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g02793 503 PRINTS E-class P450 group I signature 421 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g02793 503 PRINTS E-class P450 group I signature 55 74 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g02793 503 PRINTS E-class P450 group I signature 79 100 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g02793 503 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g02793 503 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g02793 503 PRINTS E-class P450 group I signature 174 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g02793 503 PRINTS E-class P450 group I signature 390 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g02793 503 PRINTS E-class P450 group I signature 431 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g02793 503 PRINTS E-class P450 group I signature 349 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g02793 503 Gene3D Cytochrome P450 20 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g02793 503 CDD CYP81 59 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02793 Vivi-Chr1 60180535 60182986 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02793 1 496 Cytochrome P450 AT4G37370 58.116 0.0 603