Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02783 ATGACCTTTCTTAGGCATAGCAAAGACAGTGATATAGGAGAATGGTTGAGTTTAGGATTCAAACAAGAGATGTCTCTTCAAGATTCTATATCATCAAAGCCTCTTTACAACAAGGTATTCTCATGCAAATTCTGCATGAGAAAGTTCTACAGTTCACAAGCCTTAGGGGGTCACCAGAATGCACACAAAAGGGAAAGAGAAGCAGCTAGAAGTTACCAATTATCTCATAGGATGATGCCATCATCTTCATCAATGGAACTTGGTTATTCTAAATCTTTGACAGCAAGGCCACTAGGAATCAAATCTCACTCTCTCGTGCACAAACCAAACAGAGAAACAGCTTCTACTGTGGCATGGACACCACTTGTTATTGAACAAGGGGTGAATTTTGTATGGCATGGAAGCTTTCGAATGAGCTTACCAAAGGAAGAATCACATATCCAAAAGCTTGACTTAGAACTTAGGCTTTGA 471 0.397 MTFLRHSKDSDIGEWLSLGFKQEMSLQDSISSKPLYNKVFSCKFCMRKFYSSQALGGHQNAHKREREAARSYQLSHRMMPSSSSMELGYSKSLTARPLGIKSHSLVHKPNRETASTVAWTPLVIEQGVNFVWHGSFRMSLPKEESHIQKLDLELRL 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02783 156 SUPERFAMILY beta-beta-alpha zinc fingers 37 67 IPR036236 -
Vivi1g02783 156 PANTHER ZINC FINGER PROTEIN 4-LIKE 7 156 - -
Vivi1g02783 156 ProSiteProfiles Zinc finger C2H2 type domain profile. 40 67 IPR013087 -
Vivi1g02783 156 ProSitePatterns Zinc finger C2H2 type domain signature. 42 62 IPR013087 -
Vivi1g02783 156 Gene3D Classic Zinc Finger 17 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02783 Vivi-Chr1 59993460 59993930 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02783 38 115 C2H2 Transcription Factor Family AT1G80730 44.444 1.83e-17 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02783 - - psat:127136571 233.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g02783 1 59993460 59993930 Vivi1g02783 1 59993460 59993930 ECH