Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02759 ATGGATACATTGTTTAGGCTAGTCAATTTTCAACAACAACAACAACATCATCAATATCAACCCGATCCTACTTCCCTCAACTCCACCACCACCTTAACAACATCTAGCAGCTCTAGATCCTCAAGACAAACCACAACAACAACCACAAACTATCATTATTACCAACATCAAGAAGAAGACGAAGAATGCTTCAACAACTTCTATTACATGGATCATAACAATACCAATGATGAAGACTTATCTTCCTCTTCTTCTAAACAACACTACTACAATTATCCTTATGATCAACAACAAACTCACCCTCATCATCATCATGTATCCACTACTACAATCACTACTTCTTCTCCAAACACAAACTTTAATACTATTAACACCCCCACCACCACTGATATTAACTGCTCATTCTCACCCACTCAAGAATATTTCAACTTCGACTTCTCCTCCGGTAACTCATGGTCGCAAAACATTCTCCTTGAAACCGCACGTGCCATTTCCGACAACGACACAAACCGAATCCAACAACTCATGTGGATGCTCAACGAGCTTAGTTCACCTTACGGCGATACAGATCAAAAACTCTCAGCATATTTCCTCCAAGCTTTGTTCAGCCGCATGAACGATGCAGGTGACAGAACCTACAAAACCTTAACATTCGCGTCTGAGAAAACATGTTCCTTCGACTCAACGAGGAAGATGTTGTTGAAGTTCCAAGAAGTTAGTCCATGGACTACGTTTGGACACGTGGCGTCCAATGGTGCTATCTTGGAAGCATTAGAAGGTAACCCTAAACTTCACATAATTGATATCAGCAACACGTATTGCACTCAATGGCCAACGCTTCTCGAAGCGTTGGCCACTCGCTCCGACGATACACCGCACCTCCGTTTAACCACGGTAGTCACAGCCGTCAGTGGTGGCTCCGTTCAGAAAGTCATGAAGGAAATCGGAGCAAGGATGGAGAAATTCGCGAGGCTCATGGGAGTTCCGTTTAAGTTCAAAATCATTTTCAGTGATCTAAGGGAGTTGAATTTAAGAGAGTTGGATATTAAAGAGGATGAAGCTTTGGCTATAAATTGTGTTAACTCTTTGCATTCAATTTCCGGCGCCGGGAACCACCGTGATAGTTTGATTAATTTTCTTCGTGGACTAGAGCCTAGGGTTATGACGGTGGTGGAAGAGGAAGCTGATTTAGAACATTGTTTTGGCTCAGATTTCGTGGAAGGTTTTGGAGAGAGTTTGAGATGGTTTAGGGTTTTTTTCGAAGCACTTGAAGAGAGTTTTTCGAGAACCAGTTGTGAGAGGTTGATGCTTGAAAGAGAAGCAGGGAGAGGAATTGTTGATTTGGTTGCTTGTGATGCTTTTGAGTCAGTGGAGAGACGCGAAACGGCGGCGCGGTGGAGGAGGCGTTTGCAACGTGGAGGGTTTACTACGGCGGCATTCAGCGAAGAGGTTTGTGATGATGTGAGAGCGTTGTTGAGGAGGTATAGAGAAGGGTGGTCCTTGACACCGTGCTCCGCTGCTGATGACGGAATATTTTTGTCGTGGAAGGATAAGCCGGTGGTGTGGGCCAGTGTATGGAGGCCTTGA 1587 0.4423 MDTLFRLVNFQQQQQHHQYQPDPTSLNSTTTLTTSSSSRSSRQTTTTTTNYHYYQHQEEDEECFNNFYYMDHNNTNDEDLSSSSSKQHYYNYPYDQQQTHPHHHHVSTTTITTSSPNTNFNTINTPTTTDINCSFSPTQEYFNFDFSSGNSWSQNILLETARAISDNDTNRIQQLMWMLNELSSPYGDTDQKLSAYFLQALFSRMNDAGDRTYKTLTFASEKTCSFDSTRKMLLKFQEVSPWTTFGHVASNGAILEALEGNPKLHIIDISNTYCTQWPTLLEALATRSDDTPHLRLTTVVTAVSGGSVQKVMKEIGARMEKFARLMGVPFKFKIIFSDLRELNLRELDIKEDEALAINCVNSLHSISGAGNHRDSLINFLRGLEPRVMTVVEEEADLEHCFGSDFVEGFGESLRWFRVFFEALEESFSRTSCERLMLEREAGRGIVDLVACDAFESVERRETAARWRRRLQRGGFTTAAFSEEVCDDVRALLRRYREGWSLTPCSAADDGIFLSWKDKPVVWASVWRP 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02759 528 MobiDBLite consensus disorder prediction 12 48 - -
Vivi1g02759 528 ProSiteProfiles GRAS family profile. 144 527 IPR005202 -
Vivi1g02759 528 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 117 520 IPR005202 -
Vivi1g02759 528 Pfam GRAS domain family 155 527 IPR005202 -
Vivi1g02759 528 MobiDBLite consensus disorder prediction 97 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02759 Vivi-Chr1 59433323 59435295 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02759 1 528 GRAS Transcription Factor Family AT4G37650 55.616 0.0 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vivi1g02759 GRAS 1.4e-106 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02759 - - vvo:131607159 926.391