Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02747 ATGGAACTTTTCAGCTTAACACAAGATGCTGATTCAAATCAACGCTTAGCTTATTGTTTCCTTAGAGCTCTTACCAATCGTGCAGCAAAAACTGGTACCTGCAAAATGCTAGTAGAACAAGTTTATTCAAGCGCTCATAACAGTCTCACAGTAGATACACACAGATTCTCAGTCATTGAGCTAGCTCATTTTGTCGATTTAACACCTTGGCATCGATTTGGTTTCGCAGCAGCTAATGCAGCCATACTTGAAGCAACGGAAGGTTTCTCGGTTATTCATATTGTTGATTTGAGTTCAACTCATTGCATGCAGATTCCTACATTAATCGATGCTATCGCTAATCGTCACGAAGTTGCTCCTTTAATCAAACTCACGGTTTCTGATCATGCTAATAGCAGTGATCACGAACTTCCACCTAAACTTGATCTTTCTTACGAAGAATTAGGATCTAAGTTGGTGAATTTCGCTAGGTCGAGAAATGTAACATTGGAATTCAGAGTAGTTTCTTCGAGTTACACAAATGGTTTCGCTTCGTTGATTGAACATTTGCAAGTTCAACGTTTAGTTTATTCCGGTGAAGCCTTGGTTATTAACTGTCACATGATGCTTCATTATATTCCAGATGAAACCCTATCGAATTCAAACTCTTATGTTTATGATTCTATATCTTCTTCTTCTAGTATAACTTCTGCTACTACTACTACTACTTCACTAAGATCGTTGTTTCTTAAGGCGCTTCGAGGTTTAGATCCAACACTAGTTGTATTAGTAGATGAAGATGTTGATTTAACTTCAAACAACTTGGTGAATAGATTAAGGTCAGCATTTAACTATCTATGGATACCTTATGATACGGTCGAAACTTTTCTGCCGCGCGGAAGCAAACAAAGGCAATGGTATGAAGCTGATATATGTTGGAAGATAGAGAATGTGATAGCTCATGAAGGTGTTCAAAGAGTGGAGAGAGTTGAGCCTATAGGAAAATGGGAACAAAGAATGAGAAATGCGAATTTTCAAGGGATTGGATTTGGTGAGGAATGTGTTGGTGAAGTGAAAGCTATGCTTGATGAACATGCTGCTGGGTGGGGGTTGAAGAAAGAAGATGAGTGTATTGTGCTTACATGGAAAGGTCATAATGTTGTCTTTGCTTCTGCTTGGTTGAATGCTTAA 1170 0.3846 MELFSLTQDADSNQRLAYCFLRALTNRAAKTGTCKMLVEQVYSSAHNSLTVDTHRFSVIELAHFVDLTPWHRFGFAAANAAILEATEGFSVIHIVDLSSTHCMQIPTLIDAIANRHEVAPLIKLTVSDHANSSDHELPPKLDLSYEELGSKLVNFARSRNVTLEFRVVSSSYTNGFASLIEHLQVQRLVYSGEALVINCHMMLHYIPDETLSNSNSYVYDSISSSSSITSATTTTTSLRSLFLKALRGLDPTLVVLVDEDVDLTSNNLVNRLRSAFNYLWIPYDTVETFLPRGSKQRQWYEADICWKIENVIAHEGVQRVERVEPIGKWEQRMRNANFQGIGFGEECVGEVKAMLDEHAAGWGLKKEDECIVLTWKGHNVVFASAWLNA 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02747 389 ProSiteProfiles GRAS family profile. 1 387 IPR005202 -
Vivi1g02747 389 Pfam GRAS domain family 8 386 IPR005202 -
Vivi1g02747 389 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 9 376 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02747 Vivi-Chr1 59075599 59077345 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02747 9 387 GRAS Transcription Factor Family AT3G49950 56.658 1.46e-148 425
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vivi1g02747 GRAS 1.5e-82 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02747 - - vvo:131643723 717.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g02747 1 59075599 59077345 Vivi1g02747 1 59075599 59077345 ECH