Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02746 ATGACGCAATTTACACCTTCACTACCTTATATGCTTTCAAACCCTTCTTCTTCCATGAACAAAAACAATCAAATACCAACTAAACCATGGTTCCCAACTTCCAAAGCCTTATCAACCTTTGGTGACACGAATTGCATGGAACAGTTACTTGTTCATTGTGCAAACGCAATCGAAACCAATGATGTAACACTTGCTCAACAAATCCTTTGGGTTCTCAACAACATAGCACCGCAAGATGGCGATTCAAATCAACGCTTAGCATATAGTTTCCTTAGAGCTCTTACCAACCGCGCAGCGAAAACCGGTACCTGTAAAATGCTAGTAGAACAAGTTTATTCAAGCGCTCATAACAATCTTACAGTAGATACACACAGGTTCTCGGTGATTGAACTAGCTAATTTTGTTGATTTAACACCTTGGCATCGATTTGGTTTCGCAGCAGCTAATGCAGCCATACTTGAAGCAACGGAAGGTTTCTCGGTTATTCATATTGTTGATTTGAGTTCAACTCATTGCATGCAGATTCCTACATTAATCGACGCTATCGCTAATCGTCACGAAGTTGCTCCTTTAATCAAACTCACTGTTTCTGATCATGCTAATAGCAGTGATCATGAACTTCCACCTAAACTTGATCTTTCTTACGAAGAATTAGGATCTAAGTTGGTGAATTTCGCTAGGTCGAGAAATGTAACATTGGAATTCAGAGTAGTTTCTTCTAGTTACACAAATGGTTTCGCTTCTTTGATTGAACATTTGCAAGTTCAACGTTTAGTTTATTCCGGTGAAGCCTTGGTTATTAACTGTCACATGATGCTTCATTATATTCCAGATGAAACCCTATCAGATTCAAACTCTTATGTTTATGATTCTATATCTTCTTCTTCTAGTATAACTTCTGCTACTACTACTACTTCACTAAGATCGTTGTTTCTTAAGGCGCTTCGAGGTTTAGATCCAACACTAGTTGTATTAGTAGATGAAGATGTTGATTTAACTTCAAACAACTTGGTGAATAGATTAAGGTCCGCATTTAACTATCTATGGATACCTTATGATACCGTCGAAACTTTCCTGCCGCGCGGAAGTAAACAAAGGCAATGGTATGAAGCTGATATATGTTGGAAGATAGAGAATGTGATAGCTCATGAAGGTGTTCAAAGAGTGGAGAGAGTTGAGCCTATAGGAAAATGGGAACAAAGAATGAGAAATGCAAATTTTCAAGGGATTGGATTTGGTGAGGAATGTGTTGGTGAAGTGAAAGCTATGCTTGATGAACATGCTGCTGGATGGGGATTGAAGAAAGAAGATGAGTGTATTGTGCTTACATGGAAAGGTCATAATGTTGTCTTTGCTTCTGCTTGGTTGAATGCTTAA 1377 0.3842 MTQFTPSLPYMLSNPSSSMNKNNQIPTKPWFPTSKALSTFGDTNCMEQLLVHCANAIETNDVTLAQQILWVLNNIAPQDGDSNQRLAYSFLRALTNRAAKTGTCKMLVEQVYSSAHNNLTVDTHRFSVIELANFVDLTPWHRFGFAAANAAILEATEGFSVIHIVDLSSTHCMQIPTLIDAIANRHEVAPLIKLTVSDHANSSDHELPPKLDLSYEELGSKLVNFARSRNVTLEFRVVSSSYTNGFASLIEHLQVQRLVYSGEALVINCHMMLHYIPDETLSDSNSYVYDSISSSSSITSATTTTSLRSLFLKALRGLDPTLVVLVDEDVDLTSNNLVNRLRSAFNYLWIPYDTVETFLPRGSKQRQWYEADICWKIENVIAHEGVQRVERVEPIGKWEQRMRNANFQGIGFGEECVGEVKAMLDEHAAGWGLKKEDECIVLTWKGHNVVFASAWLNA 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02746 458 ProSiteProfiles GRAS family profile. 37 456 IPR005202 -
Vivi1g02746 458 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 45 445 IPR005202 -
Vivi1g02746 458 Pfam GRAS domain family 46 455 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02746 Vivi-Chr1 59068664 59071543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02746 26 456 GRAS Transcription Factor Family AT3G49950 57.471 1.23e-173 491
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vivi1g02746 GRAS 1.2e-93 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02746 - - cam:101509453 737.643