Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02738 ATGGGTGAAGAAAATTTGAGTAGTGCGGTGGTTGTTAGTGTGAGAGAGTTTGATCCAAATAAAGATAGAGAAAGTGTGGAAGCCGTTGAAAAAATATGTGAAGTTGGTCCCAGTGGAAAACTTTCCCTCTTCACCGACTTGCACGGTGACCCTATTTGCAGGGTCCGCAACTCACCAACTTTCCTTATGCTGGTAGCTGAAATAGACAATGAGACAGTCGGAATGATTCGAGGTTGCATCAAAACAGTTACATGCGGGAAAAAGATGATAAGATCAACGAAAATGATCACCAAGAACATGAAAACCGGCGAGTCAAATTCCGATCATGTCCCTGTTCCAGTGTTTACGAAACTCGCTTACGTGTTAGGCCTTCGAGTTTCGCCGAATCACAGAAGAATGGGGATAGGGTTAAAACTGGTACAGAAAATGGAGGAATGGTTCAGAGAGAATGGGGCTGAGTATTCATACATGGCAACGGAAAACGACAACGTTGCATCAGTTAAGCTTTTTACCGATAAATGCGGTTACTCAAAGTTTCGTACACCGTCGATTCTCGTGAACCCGGTTTTCGCTCATCGAATGAAAACGTCGTCGTCGAAGGTAAGCATCATTAAGCTTACACCAAACGACGCCGAATCGATTTACCGTAACAAATTCTCCACCACCGAGTTTTTTCCTCGTGACATTGATTCTGTTTTGAAAAACAAACTCACTCTCGGAACTTTTCTCGCTGTTCCGAGTAACGGAAAATATGGGACTGGGCCTGATAATTGGGCTGGGCCGGAGGCTTTTTTAATGGATCCACCGAGTTCTTGGGCTTTGGTTAGTGTTTGGAATTGTAAAGACTTGTTTACCCTCGAAGTGAAAGGCGCGTCGCGCGTGAGACGCGTATTGGCTAAAACAACTCGCGTGATAGACAAGGCTTTTCCGTGGTTACGTTTACCTTCGATTCCGAATTTTTTTGAACCGTTTGGGTTTCATTTGATGTATGGAATTGGTGGGGAAGGACCTGAAGCATTGAAAATGGTGAAATCTTTATGTGGTGTTGCTCATAATCTTGCTATGGAAAATGGTTGTAGTGCGGTTGCTACTGAGGTTTCTAGCTGCGAACCGTTAAGGTTTGCTATTCCTCATTGGAAGGCTTTGTCTTGTGAAGAGGATTTGTGGTGTATTAAGAGACTTGGGGAGGATTATAGTGATGGTGCTGTTGGTGATTGGACTAAATCTCCACCTGGATTTTCCATTTTTGTTGATCCTAGAGAGTTTTAG 1269 0.4366 MGEENLSSAVVVSVREFDPNKDRESVEAVEKICEVGPSGKLSLFTDLHGDPICRVRNSPTFLMLVAEIDNETVGMIRGCIKTVTCGKKMIRSTKMITKNMKTGESNSDHVPVPVFTKLAYVLGLRVSPNHRRMGIGLKLVQKMEEWFRENGAEYSYMATENDNVASVKLFTDKCGYSKFRTPSILVNPVFAHRMKTSSSKVSIIKLTPNDAESIYRNKFSTTEFFPRDIDSVLKNKLTLGTFLAVPSNGKYGTGPDNWAGPEAFLMDPPSSWALVSVWNCKDLFTLEVKGASRVRRVLAKTTRVIDKAFPWLRLPSIPNFFEPFGFHLMYGIGGEGPEALKMVKSLCGVAHNLAMENGCSAVATEVSSCEPLRFAIPHWKALSCEEDLWCIKRLGEDYSDGAVGDWTKSPPGFSIFVDPREF 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02738 422 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 12 196 IPR000182 GO:0016747
Vivi1g02738 422 FunFam Probable N-acetyltransferase HLS1-like 21 183 - -
Vivi1g02738 422 Pfam Acetyltransferase (GNAT) family 58 176 IPR000182 GO:0016747
Vivi1g02738 422 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 53 178 IPR016181 -
Vivi1g02738 422 Gene3D - 48 182 - -
Vivi1g02738 422 CDD NAT_SF 63 154 - -
Vivi1g02738 422 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 11 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02738 Vivi-Chr1 58785214 58787139 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vivi1g02738 Acetyltransf_1 1.1e-17 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02738 - - vvo:131607179 865.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g02738 1 58785214 58787139 Vivi1g02738 1 58785214 58787139 ECH
Vivi2g03452 2 141019701 141021406 Vivi1g02738 1 58785214 58787139 PCT