Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02735 ATGAAATTCAGAACTTATTATCATTATCATTTCAGTTTCTTTTTTATCATTCTATTATCATCATTTTCTCTAACAATACTAACACCACTTCCTAGCAGAAGAACCTTACACCAACCGTTTTCGTTTCCGGTGAGTGCTGCTCCGCCGCCGGAGCTCTTTCCTCCTCCGCCTCCCGATGCAACTCCCTCCTCCCCTGACATTCCGTTTTTTAATGAGTTTCCGACAGGAGCAGCACCACCGCCTCCGGTGGAAAACAACCAGAATGTACCGTCTTCATCCTATAATGCTACAATTGCAAATCCGACGGCGACGAAACCTACAGAGCCGGCTAAGAAAGTTGCGATTGCGGTTTCCGTTGCATTTTCGTTATTTGTGATGTTCTCTGTAGTTGCTTTCTTCTTGTATAAGCAGAGAACTAAACCTCACTCGGAATCGGATAAAACGAAACTCTTCGGTGAGAATTCTCAGAGAATTCTAGAAGATTCCACGATGGCTGCACAACAGCCTTCAAATTTCCTCTACATTGGAACTGTTGTAGAACCAAACGGAACGCCGGTAGGTGTAGCTAACCCTCACAAAATTAATCCTATCGGTAACCGTTACCGGCCGAGTCCCGAGTTGCATCCATTGCCTCCTCTTACGAAATCTCTCGTCGTGGATAGTCACTCGCCACCGGCGGTGTCCTCGTCGTCTTCGTCGGATAATGATGAAAGCCGCGAGACGGAGACGGAGTTTCATTCTCCGCAGGAGTCTTCTTCACTCAATCTCAGCCGTGAAGGAAGCTATTACACGCCGGTCTCGCGTCAGAGTTCTCTTGCAAACGGAAGCCCTACAGTGCCGGTTTCGGTTTCTCCGGTGGTTCCTTTTTCAAAGCGAACTTCGCCGAAATCTCGATTATCTGGTTCTTCGCCGGATATCAGACACGCGATGATACCTTCCATAAAGCACGTTGAGAAAGAAGCGACATTAGGTGGTGGTGGTCCTTCTAGAAGACCGAAATTCTCATCGCCGCCACCAGCGCCCAATTTGACGCATCTTCATTCAAACGACCTAAAGGATTCACTCAGTTTACCTCCTCCGCCTCCACCACCTCCGCCACCGAGAAATTTTAGGTCGCCGGTAGTTAGTGCATCCTCTTCTTCTCCTTCTCGAAAGTATAAATGGACTCAGCCACGAAGTCATGGAGAGGATTCTGCATCTGGTAACAGTTTGAGTGTCAAGAAAGTTTCCAAGGAAGATGATGAAATGGAAATGGATGGAGGAAAACCTAAGTTGAAAGCTCTGCATTGGGATAAAGTGCGTGCTACTTCAGATCGTGCTACTGTATGGGACCAATTAAAATCAAGCTCATTTCAATTAAACGAGGACATGATGGAGACTCTGTTTGGTTGTAATTCATTGAATTCTGCACCTAAGCCTAAAGAAATGTCTGTTAACAGGAAACCAGTTTTTGCCTCGGTTGAACAAGAGAATAGAGTGTTAGATCCAAAGAAATCCCAAAACATAGCTATACTACTCAGGGCATTGAATGTCACAAGAGATGAGGTTTCTGAAGCTCTTTTAGATGGAAATCCTGAAGGTTTGGGTACTGAGTTATTGGAAACTCTAGTGAAGATGGCTCCAACGAAGGAGGAGGAAATAAAACTAAAACATTATGATGGCAATCTTTCAAAACTTGGGCCTGCAGAAAGATTTCTTAAAGCAGTGCTTGATGTCCCTTTAGCTTTTAAAAGAGTTGAAGCCATGCTATACAGAGCTAATTTTGAAACAGAAGTTAACTACCTTAAGAAATCCTTTCAAACCCTGGAGGCAGCAAGTGAGGAACTAAAGAACAGCCGGTTATTCCTCAAACTCCTTGAAGCTGTTCTCAAGACAGGAAACAGAATGAATGTTGGAACCAATCGCGGTGATGCTAAATCTTTCAAACTAGATACACTCCTGAAACTTGCAGATATAAAAGGAACTGATGGAAAGACCACATTGCTCCATTTTGTTGTTCAAGAAATTATTAGATCTGAAGGTACAGGCGACGAATCTGCAAATGAGAATGTTCAAAACCAAACAAATTCCCAGTTCAACGAGGATGAGTTCAAAAAGAAAGGATTACAGGTTGTGGCTGGATTGAGTAGAGACTTTGGTAATGTAAAAAAGGCAGCAGGAATGGACTCAGATGTCTTAAGCGGCTATGTCATAAAGCTTGAAATGGGGCTTGATAAAGTGAGATTGATTTTGCAATATGTAAAACCTGATATGCAAGGGAACTTCTTTAACTCAACAGAGATATTCATGAAAGATGCTGAAGAGAAAATATTAAGGATCAAAGCTGATGAGATAAGGGCCTTATTCCTTGTGAAAGAAGTTACAGAATACTTTCATGGGGATACAACAAAGGAAGAAGCCCACCCTTTCAGAATTTTTATGATTGTAAGAGACTTCCTAAATATTTTGGACCAAGTTTGCAAAGAAGTGGGGAAGATGCAGGATAGAACTGCGACCAATTCATCCAGATCGTTTAGGATAGCTGCAAGTGCATCGTTACCTGTTCTCAACAGGTACCGTGCAAGACAAGATACAAGTTCAGATGAGGAAAGTTTATCACCCTAG 2604 0.4309 MKFRTYYHYHFSFFFIILLSSFSLTILTPLPSRRTLHQPFSFPVSAAPPPELFPPPPPDATPSSPDIPFFNEFPTGAAPPPPVENNQNVPSSSYNATIANPTATKPTEPAKKVAIAVSVAFSLFVMFSVVAFFLYKQRTKPHSESDKTKLFGENSQRILEDSTMAAQQPSNFLYIGTVVEPNGTPVGVANPHKINPIGNRYRPSPELHPLPPLTKSLVVDSHSPPAVSSSSSSDNDESRETETEFHSPQESSSLNLSREGSYYTPVSRQSSLANGSPTVPVSVSPVVPFSKRTSPKSRLSGSSPDIRHAMIPSIKHVEKEATLGGGGPSRRPKFSSPPPAPNLTHLHSNDLKDSLSLPPPPPPPPPPRNFRSPVVSASSSSPSRKYKWTQPRSHGEDSASGNSLSVKKVSKEDDEMEMDGGKPKLKALHWDKVRATSDRATVWDQLKSSSFQLNEDMMETLFGCNSLNSAPKPKEMSVNRKPVFASVEQENRVLDPKKSQNIAILLRALNVTRDEVSEALLDGNPEGLGTELLETLVKMAPTKEEEIKLKHYDGNLSKLGPAERFLKAVLDVPLAFKRVEAMLYRANFETEVNYLKKSFQTLEAASEELKNSRLFLKLLEAVLKTGNRMNVGTNRGDAKSFKLDTLLKLADIKGTDGKTTLLHFVVQEIIRSEGTGDESANENVQNQTNSQFNEDEFKKKGLQVVAGLSRDFGNVKKAAGMDSDVLSGYVIKLEMGLDKVRLILQYVKPDMQGNFFNSTEIFMKDAEEKILRIKADEIRALFLVKEVTEYFHGDTTKEEAHPFRIFMIVRDFLNILDQVCKEVGKMQDRTATNSSRSFRIAASASLPVLNRYRARQDTSSDEESLSP 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02735 867 MobiDBLite consensus disorder prediction 407 422 - -
Vivi1g02735 867 MobiDBLite consensus disorder prediction 320 422 - -
Vivi1g02735 867 Pfam Formin Homology 2 Domain 420 816 IPR015425 -
Vivi1g02735 867 ProSiteProfiles Formin homology-2 (FH2) domain profile. 415 842 IPR015425 -
Vivi1g02735 867 PANTHER FORMIN-RELATED 11 861 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Vivi1g02735 867 Gene3D Formin, FH2 domain 424 845 IPR042201 -
Vivi1g02735 867 MobiDBLite consensus disorder prediction 247 301 - -
Vivi1g02735 867 MobiDBLite consensus disorder prediction 355 371 - -
Vivi1g02735 867 MobiDBLite consensus disorder prediction 372 406 - -
Vivi1g02735 867 SUPERFAMILY Formin homology 2 domain (FH2 domain) 358 830 - -
Vivi1g02735 867 SMART it6_source 415 831 IPR015425 -
Vivi1g02735 867 MobiDBLite consensus disorder prediction 197 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02735 Vivi-Chr1 58699183 58703293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02735 367 857 FH2 protein (formin) Gene Family AT5G67470 66.068 0.0 635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02735 - - gmx:100803578 947.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g02735 1 58699183 58703293 Vivi1g02735 1 58699183 58703293 ECH
Vivi2g03461 2 141330758 141335121 Vivi1g02735 1 58699183 58703293 PCT