Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02734 ATGCAGGAGAAGCTAAGGGTTGCTGTTTTGGTTTCGAAAGCCGCGTTTCAGTTTATTCAAGCAGGTGTTCAACCAAGCGACTACGTTCTACCTGAGGATGTTAAGGCTGCAGGTTTCCAAATCTGTGCTGAAGAATTGGGATCTATTGTCGAAGGCCATGACGTAAAGAAACTGAAGTTTCATGGTGGAGTTGATGGCATTGCGGAAAAGCTTGCGACGTCAACAACTCAAGGACTCAGTGGCGATTCTGAGTCGCGGAATAGAAGGCAAGACCTATTCGGGATCAATAAATTTGCTGAAAGTGAAATGCGAAGCTTCTGGGTTTATGTTTATGAAGCTCTTCAGGACATGACCCTCATGATCCTTGGAGTGTGCGCTTTCGTTTCTCTGATAGTAGGCGTGTTGACCGAAGGATGGCCGAAAGGAGCTCATGATGGTCTTGGAATAGTGGCAAGTATCTTACTTGTTGTCTTTGTGACTGCAACGAGTGATTATCGGCAATCGTTACAGTTTAAGGATTTAGACAAGGAGAAGAAGAAGATTTCTATTCAAGTTACCAGAAACGGTTATAGACAGAAAATGTCGATATACAACTTACTTCCCGGTGATATTGTTCATCTAAACATTGGAGACCAAGTACCTGCAGATGGACTATTTGTTTCAGGGTTTTCGGTGTTGATCGACGAATCAAGTTTAACCGGCGAGAGTGAGCCAATAATGGTTACTTCCCAAAATCCATTTCTTCTCTCAGGAACAAAAGTCCAAGATGGATCATGCACTATGTTGATTACCACTGTTGGAATGAGGACTCAATGGGGTAAACTGATGGCGACTCTTAGCGAAGGCGGAGACGATGAAACACCATTGCAGGTGAAACTTAATGGAGTTGCTACCATTATTGGAAAGATAGGACTAGTCTTTGCAGTGATTACCTTTACAGTTTTGGTTAAAGGACACTTGGGCAAAAAAATCCGCGAAGGAAGATTCTGGAGGTGGGCTGGTGATGATGCAATGGAGATGTTGGAATTCTTCGCTATTGCGGTTACTATTGTCGTTGTCGCTGTTCCGGAGGGTTTACCATTAGCTGTGACATTGAGTCTTGCATTTGCAATGAAGAAGATGATGAATGATAAAGCCTTGGTTAGGCATTTAGCAGCATGTGAAACTATGGGATCAGCCACAACTATATGTAGTGATAAAACCGGTACACTAACAACCAACCGAATGACAGTTGTGAAAACGTGCATTTGTATGAATAGCAAAGAAGTGAACAATCATGAATCTAGTCTACCAGACTCCGCATTAAAACTGCTGCTACAATCGATATTTAATAACACCGGAGGAGAGGTTGTGTATAACAAAAAAGGCAAACGCGAGATATTGGGGACGCCAACCGAATCAGCAATATTGGAATTTGGTTTGTCACTAGGAGGTGATTCTAAGGCTGAGAGAAAAGCTTGCAAAATTGTTAAAGTTGAGCCATTCAACTCTGAGAAGAAAAGAATGGGAGTAGTAGTGGAGCTACCTGATGGAAGTTTAAGAGCTCATTGCAAAGGTGCTTCTGAAATAATTCTAGCTGCCTGCGACAAAGTTATTGATTCAAACGGAGAAGTTGTCGGGCTTGATGGAGAATCAATTAATTATCTTAACAGTATTATTAACCAGTTTGCTAATGAGGCACTTAGAACTCTTTGTCTCGGCTATATGGAATTGGAAAACGGGTTTTCTGCCGATGATCCGATTCCGGCTTCTGGTTATACTTGTATTGGAATTGTTGGTATCAAAGATCCGGTTCGCCCTGGTGTTAAGGAGTCTGTCGCAGAGTGTCGTTCGGCTGGAATAGTGGTAAGAATGGTTACAGGAGACAATATTAATACTGCAAAGGCTATAGCCAGGGAATGTGGAATTTTAACAGATGATGGCATAGCTATTGAAGGTCCTGACTTTAGAGAGAAGACTCAAGAGGAATTGTTTGAACTCATTCCCAAAATTCAGGTTATGGCTAGATCATCACCGTTAGACAAACATACATTGGTGAGACAGCTGCGTACAACATTCGGGGAAGTTGTAGCTGTAACTGGTGATGGAACAAATGATGCTCCAGCACTTCATGAAGCCGACATCGGACTTGCAATGGGAATTGCTGGAACTGAGGTTGCTAAAGAAAGTGCAGATGTTATAATTCTTGATGACAATTTCTCCACAATAGTGACAGTGGCGAGATGGGGACGGTCCGTTTACATCAATATCCAGAAATTTGTACAGTTTCAGCTTACTGTAAACGTGGTTGCGTTACTAGTAAACTTCTCTTCGGCCTGCATGACAGGGAGTGCACCACTCACAGCAGTTCAACTTTTGTGGGTGAATATGATAATGGACACTTTGGGAGCACTCGCACTTGCAACTGAACCTCCAACCGATGATTTGATGAAGCGTGAACCGGTGGGAAGGAAAGGTGATTTCATCAGTAGTGTCATGTGGAGAAATATCTTAGGACAAGCATTGTATCAGTTTGTGGTGATTTGGTTTCTTCAGGGAGTAGGAAAATGGGTTTTTTTTCTTAGGGGCCCCAATGCTGATGTAGTCTTAAACACACTCATTTTCAACACATTTGTCTTCTGTCAGGTTTTTAATGAGATAAACTCTCGTGAGATGGAGGAAATAGATGTTTTTAAGGGCATATGGGATAATCAGGTGTTTGTGACGGTCATCAGTGCAACTGTAATCTTCCAAATCATAATAGTTGAGTACTTGGGAACCTTTGCAAATACAACACCTCTATCTCTGGTACAATGGATCTTTTGCTTAGGGGCTGGATATATGGGCTTGCCGATCGCAATTCGCTTGAAGCAGATACCAGTCTGA 2865 0.4234 MQEKLRVAVLVSKAAFQFIQAGVQPSDYVLPEDVKAAGFQICAEELGSIVEGHDVKKLKFHGGVDGIAEKLATSTTQGLSGDSESRNRRQDLFGINKFAESEMRSFWVYVYEALQDMTLMILGVCAFVSLIVGVLTEGWPKGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKISIQVTRNGYRQKMSIYNLLPGDIVHLNIGDQVPADGLFVSGFSVLIDESSLTGESEPIMVTSQNPFLLSGTKVQDGSCTMLITTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLVFAVITFTVLVKGHLGKKIREGRFWRWAGDDAMEMLEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNRMTVVKTCICMNSKEVNNHESSLPDSALKLLLQSIFNNTGGEVVYNKKGKREILGTPTESAILEFGLSLGGDSKAERKACKIVKVEPFNSEKKRMGVVVELPDGSLRAHCKGASEIILAACDKVIDSNGEVVGLDGESINYLNSIINQFANEALRTLCLGYMELENGFSADDPIPASGYTCIGIVGIKDPVRPGVKESVAECRSAGIVVRMVTGDNINTAKAIARECGILTDDGIAIEGPDFREKTQEELFELIPKIQVMARSSPLDKHTLVRQLRTTFGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVARWGRSVYINIQKFVQFQLTVNVVALLVNFSSACMTGSAPLTAVQLLWVNMIMDTLGALALATEPPTDDLMKREPVGRKGDFISSVMWRNILGQALYQFVVIWFLQGVGKWVFFLRGPNADVVLNTLIFNTFVFCQVFNEINSREMEEIDVFKGIWDNQVFVTVISATVIFQIIIVEYLGTFANTTPLSLVQWIFCLGAGYMGLPIAIRLKQIPV 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02734 954 PANTHER CATION TRANSPORTING ATPASE 38 953 - -
Vivi1g02734 954 FunFam Calcium-transporting ATPase 160 280 - -
Vivi1g02734 954 PRINTS H+-transporting ATPase (proton pump) signature 549 567 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vivi1g02734 954 PRINTS H+-transporting ATPase (proton pump) signature 693 709 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vivi1g02734 954 PRINTS H+-transporting ATPase (proton pump) signature 725 750 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vivi1g02734 954 NCBIfam HAD-IC family P-type ATPase 338 444 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vivi1g02734 954 NCBIfam HAD-IC family P-type ATPase 664 777 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vivi1g02734 954 NCBIfam HAD-IC family P-type ATPase 485 638 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vivi1g02734 954 SUPERFAMILY Calcium ATPase, transduction domain A 183 277 IPR008250 -
Vivi1g02734 954 Pfam E1-E2 ATPase 181 375 - -
Vivi1g02734 954 Gene3D - 407 597 IPR023299 GO:0000166
Vivi1g02734 954 Gene3D - 394 738 IPR023214 -
Vivi1g02734 954 SFLD C1.7: P-type atpase like 379 745 - -
Vivi1g02734 954 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 406 597 IPR023299 GO:0000166
Vivi1g02734 954 SUPERFAMILY HAD-like 395 798 IPR036412 -
Vivi1g02734 954 FunFam Calcium-transporting ATPase 407 597 - -
Vivi1g02734 954 FunFam Calcium-transporting ATPase 586 738 - -
Vivi1g02734 954 ProSitePatterns E1-E2 ATPases phosphorylation site. 399 405 IPR018303 -
Vivi1g02734 954 PRINTS P-type cation-transporting ATPase superfamily signature 612 622 - -
Vivi1g02734 954 PRINTS P-type cation-transporting ATPase superfamily signature 590 601 - -
Vivi1g02734 954 PRINTS P-type cation-transporting ATPase superfamily signature 693 712 - -
Vivi1g02734 954 PRINTS P-type cation-transporting ATPase superfamily signature 717 729 - -
Vivi1g02734 954 PRINTS P-type cation-transporting ATPase superfamily signature 397 411 - -
Vivi1g02734 954 PRINTS P-type cation-transporting ATPase superfamily signature 228 242 - -
Vivi1g02734 954 SFLD p-type atpase 379 745 IPR044492 -
Vivi1g02734 954 Pfam Cation transporting ATPase, C-terminus 778 947 IPR006068 -
Vivi1g02734 954 FunFam Calcium-transporting ATPase 710 954 - -
Vivi1g02734 954 SUPERFAMILY Calcium ATPase, transmembrane domain M 61 953 IPR023298 -
Vivi1g02734 954 Gene3D - 112 938 - -
Vivi1g02734 954 Pfam Cation transport ATPase (P-type) 453 531 - -
Vivi1g02734 954 Gene3D - 83 280 - -
Vivi1g02734 954 Pfam Cation transporter/ATPase, N-terminus 61 129 IPR004014 -
Vivi1g02734 954 NCBIfam calcium-translocating P-type ATPase, PMCA-type 54 954 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Vivi1g02734 954 CDD P-type_ATPase_Ca_PMCA-like 87 826 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02734 Vivi-Chr1 58695235 58699143 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02734 2 954 Primary Pumps ATPases AT4G37640 81.420 0.0 1587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02734 K01537 - gmx:100776926 1717.98