Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02703 ATGCTCTCCACCCTCCCTCCCTCCGACCCTTTTCTCGACCACCCATTCTCCGCCGGTTTCCCACCTTGGGATTTCCATGACCTATTTTCCGACGACCTCGAATCCACCACTCCCATAACCATAACTTCAACCTCCGGTTCAGACGAACCGAACCAACCCCACGAGAAACGTAAACCGGACTCAGACGAACCGAACCACCGGTCCGTAGTCATAGACGAGAGAAAGCGGAGACGCATGTTATCGAACCGGGAATCTGCCCGAAGATCACGGATGCGGAAACAACGACACGTGGAGAATCTAAGGAACCAGTTGAACAAGTGTAGAATCGAAAACCGGGAACTCAAAAACCGGTTGCAATTCATTGTGTTTCACTATAACCGCATAAGAACCGAAAACGAATGGCTCCGGTCCGAGCGAACCGTGCTGAACCAAAGAATCAACAACTATACTCAAATTTTGGTTTACCAACAGTTCCAATTTCAACCTTTCTCCACTGCATGGACATGTAACACTACTACGGTGGAATAA 528 0.4905 MLSTLPPSDPFLDHPFSAGFPPWDFHDLFSDDLESTTPITITSTSGSDEPNQPHEKRKPDSDEPNHRSVVIDERKRRRMLSNRESARRSRMRKQRHVENLRNQLNKCRIENRELKNRLQFIVFHYNRIRTENEWLRSERTVLNQRINNYTQILVYQQFQFQPFSTAWTCNTTTVE 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02703 175 FunFam BZIP transcription factor 72 122 - -
Vivi1g02703 175 PANTHER BZIP TRANSCRIPTION FACTOR 44 36 156 - -
Vivi1g02703 175 SMART brlzneu 70 134 IPR004827 GO:0003700|GO:0006355
Vivi1g02703 175 Pfam Basic region leucine zipper 72 119 IPR004827 GO:0003700|GO:0006355
Vivi1g02703 175 MobiDBLite consensus disorder prediction 37 99 - -
Vivi1g02703 175 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 72 135 IPR004827 GO:0003700|GO:0006355
Vivi1g02703 175 Gene3D - 72 122 - -
Vivi1g02703 175 Coils Coil 83 117 - -
Vivi1g02703 175 MobiDBLite consensus disorder prediction 50 87 - -
Vivi1g02703 175 CDD bZIP_plant_GBF1 75 119 IPR045314 GO:0003700|GO:0006355
Vivi1g02703 175 SUPERFAMILY Leucine zipper domain 74 122 IPR046347 GO:0003700|GO:0006355
Vivi1g02703 175 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 77 92 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02703 Vivi-Chr1 57927845 57928726 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02703 1 162 bZIP Transcription Factor Family AT2G22850 36.866 7.86e-31 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi1g02703 bZIP_2 6.6e-05 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02703 - - ahf:112800711 209.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g03530 2 142834366 142835239 Vivi1g02703 1 57927845 57928726 PCT