Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02694 ATGAAGAGAATGGAGAATAATGATGATGCTGTTGTTGACATTAACAATGAAAATAACTGGTTGGGTTTTTCTTTGTCACCTCAAATGAATAATGTTGGTGTTCCTTCACATACTCATCATTCACAATCTTCTGCTTCTGATGTTTCTGAGGTTGTTCCATTTCCTTCAAGCTTTTACCATTCTGCCCCTCTTGGTAACTATTGTTTCTCTTATGGACTTGAACATGAAAATGTTGGTTTGTATTCATTGCTTCCCATTATGCCCCTCAAATCTGATGGATCTCTCTATGAAATGGAGCATCATCTTAGCAAGTCACAGACACAAGCAATGGTAACTACTTCAGCACCAAAACTAGAGAATTTCTTAGGTAGTGAAGCTATGGGGACCCAACATTATGCATGTAGTAGTACTACTGTCACAGAAACAATGCCTTTGAGCTTAGACAGCATGTTCCAAAACCAAGTTCAAAACATGAACAACCAACAACAACAACAACAACAACAACAGCAACAATTTTCATCATATTACTCAACTTTGAGGAACCATGAGATGATGTTAGAAGGGTCAAAGCAAAGTCAAACTTCAACTGGAAATTTTCATGTTTCAAACATGGGTGAGGATCATAGACTTGGTGGTTTAAAGAATTGGGTTTTGAGGAATTATCCGGCTAGTCATGGACTTGATCAGTCGAAGATGATTGTTCCGGTTGGTGCGGAGGATAATGAAGGTGAATCGGGTTCTAATATCGGTTCAATGGCTTATGGTGACTTGCATTCTTTGAGCTTGTCGATGAGCCCGAGCTCGCAGTCTAGCTGTGTTACAACTTCACATGTTGTTGTTGAAAATTCTGTTGCAATGGATACAAAGAAAAGAGGAAGTGAAAAGTTTGAGCAAAAGCAAATTGTTCATAGAAAATCTATTGATACTTTTGGTCAAAGAACATCTCAATATAGAGGTGTAACAAGGCATCGATGGACCGGGAGATATGAAGCTCATCTATGGGACAATAGTTGCAAGAAAGAAGGCCAAAGCCGAAAAGGAAGACAAGTTTATCTTGGTGGTTATGATATGGAAGAAAAAGCTGCTAGAGCTTATGATCAAGCAGCACTCAAGTATTGGGGACCATCCACTCACATAAACTTCCCTTTGGAAGATTATCAAAATCAACTTGAGGAAATGAAGAACATGACAAGACAAGAATATGTTGCTCATTTAAGAAGAAAAAGCAGTGGCTTCTCAAGAGGTGCTTCTATGTATAGAGGAGTAACAAGACACCATCAACATGGAAGATGGCAAGCTAGAATTGGTAGGGTGGCTGGTAACAAAGATCTATATCTTGGAACCTTCAGTACTCAAGAGGAAGCGGCTGAGGCCTACGACATAGCTGCGATAAAATTCAGAGGAGCTAATGCAGTAACCAACTTCGATATAATAAAATATGATGTTGAAAAGATCATGGCAAGTAGTAACCTTCTAAGCATTGAACTAGCTAGAAGGAACAAAGAGGTAGTAGATATTACTACAACTCAATACATTGATCCTCTCAACAACACTACTCAAGAAGCCATGCAGAAGAATATGATTCTGTATCAATCCTCTCAACAACAACAACAGCTTCAACAGAATCAACCAAGAATCGAGAACGAAAGGACTCATCAATCATTTTCCTCGGTGTCTTTGGATAACATGTTTCATCAAGAAGTAGCCGATGAAGCAAACAAGATGAGAACACATTTGTCGAATGCTTCTTCGTTGGCCACGAGCTTGAGTAGCTCAAGAGAAGGTAGCCCTGATAGGTCAAGCTTGCAGAATCTCTCAGGAATGCCTTCAACATCATCAAAACTATTGGTTACTACTGCTTCAAATAGTAATATGAATTCTTGGGACCCTTCTCAACATCATCTTAGGCCTGCTCTTTCTTTGCCTCAGATGCCAGTTTTTGCTGCTTGGACTGATGCATAG 1962 0.394 MKRMENNDDAVVDINNENNWLGFSLSPQMNNVGVPSHTHHSQSSASDVSEVVPFPSSFYHSAPLGNYCFSYGLEHENVGLYSLLPIMPLKSDGSLYEMEHHLSKSQTQAMVTTSAPKLENFLGSEAMGTQHYACSSTTVTETMPLSLDSMFQNQVQNMNNQQQQQQQQQQQFSSYYSTLRNHEMMLEGSKQSQTSTGNFHVSNMGEDHRLGGLKNWVLRNYPASHGLDQSKMIVPVGAEDNEGESGSNIGSMAYGDLHSLSLSMSPSSQSSCVTTSHVVVENSVAMDTKKRGSEKFEQKQIVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQSRKGRQVYLGGYDMEEKAARAYDQAALKYWGPSTHINFPLEDYQNQLEEMKNMTRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGANAVTNFDIIKYDVEKIMASSNLLSIELARRNKEVVDITTTQYIDPLNNTTQEAMQKNMILYQSSQQQQQLQQNQPRIENERTHQSFSSVSLDNMFHQEVADEANKMRTHLSNASSLATSLSSSREGSPDRSSLQNLSGMPSTSSKLLVTTASNSNMNSWDPSQHHLRPALSLPQMPVFAAWTDA 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02694 653 FunFam AP2-like ethylene-responsive transcription factor 417 478 - -
Vivi1g02694 653 ProSiteProfiles AP2/ERF domain profile. 418 476 IPR001471 GO:0003700|GO:0006355
Vivi1g02694 653 SMART rav1_2 316 388 IPR001471 GO:0003700|GO:0006355
Vivi1g02694 653 SMART rav1_2 418 482 IPR001471 GO:0003700|GO:0006355
Vivi1g02694 653 ProSiteProfiles AP2/ERF domain profile. 316 382 IPR001471 GO:0003700|GO:0006355
Vivi1g02694 653 CDD AP2 315 382 IPR001471 GO:0003700|GO:0006355
Vivi1g02694 653 FunFam AP2-like ethylene-responsive transcription factor ANT 315 384 - -
Vivi1g02694 653 PRINTS Ethylene responsive element binding protein signature 458 478 IPR001471 GO:0003700|GO:0006355
Vivi1g02694 653 PRINTS Ethylene responsive element binding protein signature 317 328 IPR001471 GO:0003700|GO:0006355
Vivi1g02694 653 MobiDBLite consensus disorder prediction 578 611 - -
Vivi1g02694 653 SUPERFAMILY DNA-binding domain 315 383 IPR016177 GO:0003677
Vivi1g02694 653 SUPERFAMILY DNA-binding domain 417 476 IPR016177 GO:0003677
Vivi1g02694 653 Pfam AP2 domain 419 468 IPR001471 GO:0003700|GO:0006355
Vivi1g02694 653 Pfam AP2 domain 316 374 IPR001471 GO:0003700|GO:0006355
Vivi1g02694 653 Coils Coil 151 171 - -
Vivi1g02694 653 CDD AP2 417 477 IPR001471 GO:0003700|GO:0006355
Vivi1g02694 653 Gene3D AP2/ERF domain 418 478 IPR036955 GO:0003700|GO:0006355
Vivi1g02694 653 Gene3D AP2/ERF domain 315 384 IPR036955 GO:0003700|GO:0006355
Vivi1g02694 653 MobiDBLite consensus disorder prediction 533 554 - -
Vivi1g02694 653 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 148 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02694 Vivi-Chr1 57613467 57617025 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02694 1 527 AP2-EREBP Transcription Factor Family AT4G37750 50.089 1.10e-156 461
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Vivi1g02694 AP2 1.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02694 K09285 - gmx:100792451 823.157