Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02669 ATGCGCCTCCTTCTATCATTACTCCTCTTCCTCACACTCCACTCCCTTCCCATTTCCACAACACACATCTCCGAACCCCAAACCTTACTCTCCTTCAAATCCTCTTCCATCTCAACCGACCCAACCAACTCCCTCTCCTCATGGACCACAAAAACCACCCACTGCTCCTGGCACGGTGTCCAATGCGGCCAACACCGCCACGTCATATCCATCAACCTCTCTTCCCTCTCCCTCACCGGTGTACTCTCCGACGACATTTCAAATCTCCCTTTCCTCACCAACCTCTCCCTCGCCGATAACAAATTCTCCGGCCCTATTCCTCCTTCTCTCTCGTCTCTCTCTTCTCTTCGCTACCTCAACCTCTCCAACAATGTCTTCAACGGTACTTTCCCTTCTCAGCTTTCTACTCTCGGCAACCTTCAGGTTCTTGATCTCTACAACAATAACATGACCGGTTCACTTCCTCTATCGGTTACTCACATGTCGTTTCTCCGTCATTTGCATCTCGGAGGAAACTTTTTCACCGGGAGAATCCCTTCCGAGTACGGTGTTTGGTCTCATCTCGAGTATCTTGCTGTTTCCGGTAATGAGCTTTCCGGACCTATTCCACCGGAGATCGGGAACCTTACTTCACTCCGGGAGCTTTACCTTGGTTATTATAACACCTACGAAGGTGGTATCCCGCCGGAGATTGGTAACTTATCGGAGATGGTGAGACTTGATGCTGCTTACTGTGGTTTAACCGGCGAGGTTCCGGCGGAGTTGGGTAAGCTTCAGAAGTTGGATACTTTGTTTCTTCAGGTGAATGCGCTTTCCGGGTCTCTTACGCCGGAGCTAGGGAACTTGAAGAGCTTGAAATCTATGGATTTGTCGAACAATGGTTTCACCGGTGAAGTTCCGGTGAGTTTTGCTGAGCTGAAGAATCTTACTCTTTTGAACTTGTTTAGAAACAAGCTTCATGGAGCGATACCGGAGTTTATCGGCGAGATGCCGGCGCTTGAAGTGTTGCAGATTTGGGAGAATAACTTCACCGGAAGCATTCCTCAGAGTTTGGGGAAAAACGGGAAGCTTACACTTGTTGATGTTTCTTCGAACAAGTTAACTGGTTCTCTTCCACCTTATATGTGTTTTGGGAACAAGCTTCAAACTTTGATAACTTTAGGGAATTTCCTTTTTGGTCCCATTCCAGATTCACTTGGAAAGTGTAAATCTTTAAGCAGAATCCGAATGGGTGAGAATTTTCTCAATGGGTCAATTCCAAAAGGACTTTTTGGTCTTCCAGAGCTTACACAAGTTGAGCTTCAGGATAATCTTTTATCTGGAAACTTTCCTCAACCTGTTTCTATGTCTCCGAATCTTGGTCAAGTTACTCTTTCCAACAACAAGCTTTCTGGACCATTGCCACCTTCCATTGGAAACTTCACCAGTGTTCAAAAGCTTCTCCTTGATGGGAACCAGTTTTCAGGTGAAATACCTTCTGAGATTGGGAAGTTACAACAGCTTTCTAAGATAGATTTTAGTCATAACAGATTCTCTGGTTCGATTGCGCCTGAGATTAGTCACTGTAAGCTTTTAACTTTTGTTGATCTTAGTCGTAACGAGCTTTCCGGTGAGATTCCTAATGAAATCACTAGTATGAGGATATTGAATTACTTGAACCTTTCAAAGAATCACCTTGTTGGGACTATTCCGGGGTCAATTTCCTCAATGCAAAGCTTAACTTCTGTTGATTTTTCGTACAATAATCTAACTGGTTTGGTTCCTGGTACTGGTCAATTTAGTTACTTTAACTACACTTCTTTTCTTGGTAACCCTGGACTTTGTGGACCTTATTTGGGTCCTTGCAAAGATGGTGTTGTTAATGGTCCTCATCAATCTCATGTTAAAGGACCACTGTCTTCTACTGTGAAGCTTTTGCTTGTTATTGGGTTGCTTGTGTGTTCCACTGTATTTGCTGTTGCCACAATCTTCAAAGCTCGGTCTTTGAAAAAAGCTAGCGAAGCTCGTGCGTGGAAATTAACCGCATTCCAACGGTTGGACTTTACTGTTGATGACGTTCTTGATTCCTTAAAAGAGGATAATATCATAGGAAAAGGAGGTGCTGGCATTGTTTTCAAAGGCTCAATGCCTAATGGCGATCTTGTTGCTGTGAAAAGGTTACCTGCAATGAGTAGAGGCTCTTCACATGATCATGGTTTCAATGCGGAGATTCAAACTTTAGGGAGAATTCGACACAGACACATTGTTAGATTATTGGGTTTCTGTTCAAACCATGAAACAAATCTCCTGGTTTATGAATACATGCCTAATGGAAGTTTGGGTGAAGTTCTTCATGGTAAGAAAGGTGGTCATTTGCATTGGGATACAAGGTATAAAATTGCTGTGGAGTCTGCCAAGGGTCTTTGTTATCTGCATCACGATTGTTCACCACTCATCGTTCATCGCGACGTGAAATCAAACAATATCTTACTCGATACAAGTTTTGAAGCCCATGTTGCTGATTTCGGACTTGCTAAGTTCTTGCAAGATTCTGGAACTTCTGAATGCATGTCTGCTATTGCAGGTTCTTATGGATACATAGCTCCAGAGTATGCATACACATTGAAAGTCGATGAGAAAAGCGACGTATACAGCTTTGGCGTGGTACTCTTAGAGCTAGTAGCAGGAAGAAAACCAGTTGGAGAATTTGGCGATGGAGTCGACATTGTACAATGGGTGAGAAAAATGACCGATTCAAACAAAGAAGGTGTTCTAAAAGTTCTCGATCCAAGGCTTCCCTCGGTTCCAATTCACGAGGTGATGCATGTGTTCTACGTCGCCATGCTATGCGTTGAAGAACAAGCGGTTGAAAGACCAACAATGCGCGAAGTTGTTCAAATGCTCACCGAGCTTCCGAAACCGTCCCAAAGTTCAAAACATGTTGAAGAAGACTTAACAACAATAACAATCAATGAATCATCCTCTTTGTCATCATCAAACAGTTTAGAGGCTCCAGAGAAAGAACCTAAAGATCTTCTTAGTATATGA 3027 0.4348 MRLLLSLLLFLTLHSLPISTTHISEPQTLLSFKSSSISTDPTNSLSSWTTKTTHCSWHGVQCGQHRHVISINLSSLSLTGVLSDDISNLPFLTNLSLADNKFSGPIPPSLSSLSSLRYLNLSNNVFNGTFPSQLSTLGNLQVLDLYNNNMTGSLPLSVTHMSFLRHLHLGGNFFTGRIPSEYGVWSHLEYLAVSGNELSGPIPPEIGNLTSLRELYLGYYNTYEGGIPPEIGNLSEMVRLDAAYCGLTGEVPAELGKLQKLDTLFLQVNALSGSLTPELGNLKSLKSMDLSNNGFTGEVPVSFAELKNLTLLNLFRNKLHGAIPEFIGEMPALEVLQIWENNFTGSIPQSLGKNGKLTLVDVSSNKLTGSLPPYMCFGNKLQTLITLGNFLFGPIPDSLGKCKSLSRIRMGENFLNGSIPKGLFGLPELTQVELQDNLLSGNFPQPVSMSPNLGQVTLSNNKLSGPLPPSIGNFTSVQKLLLDGNQFSGEIPSEIGKLQQLSKIDFSHNRFSGSIAPEISHCKLLTFVDLSRNELSGEIPNEITSMRILNYLNLSKNHLVGTIPGSISSMQSLTSVDFSYNNLTGLVPGTGQFSYFNYTSFLGNPGLCGPYLGPCKDGVVNGPHQSHVKGPLSSTVKLLLVIGLLVCSTVFAVATIFKARSLKKASEARAWKLTAFQRLDFTVDDVLDSLKEDNIIGKGGAGIVFKGSMPNGDLVAVKRLPAMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLHWDTRYKIAVESAKGLCYLHHDCSPLIVHRDVKSNNILLDTSFEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELVAGRKPVGEFGDGVDIVQWVRKMTDSNKEGVLKVLDPRLPSVPIHEVMHVFYVAMLCVEEQAVERPTMREVVQMLTELPKPSQSSKHVEEDLTTITINESSSLSSSNSLEAPEKEPKDLLSI 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02669 1008 Pfam Protein kinase domain 692 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g02669 1008 SMART serkin_6 690 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g02669 1008 SUPERFAMILY Protein kinase-like (PK-like) 683 961 IPR011009 -
Vivi1g02669 1008 Pfam Leucine rich repeat N-terminal domain 24 62 IPR013210 -
Vivi1g02669 1008 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 83 326 - -
Vivi1g02669 1008 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 334 619 - -
Vivi1g02669 1008 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 768 978 - -
Vivi1g02669 1008 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 230 963 - -
Vivi1g02669 1008 MobiDBLite consensus disorder prediction 965 996 - -
Vivi1g02669 1008 SUPERFAMILY RNI-like 70 391 - -
Vivi1g02669 1008 SMART LRR_typ_2 570 593 IPR003591 -
Vivi1g02669 1008 SMART LRR_typ_2 137 160 IPR003591 -
Vivi1g02669 1008 SMART LRR_typ_2 113 132 IPR003591 -
Vivi1g02669 1008 SMART LRR_typ_2 306 330 IPR003591 -
Vivi1g02669 1008 SMART LRR_typ_2 282 305 IPR003591 -
Vivi1g02669 1008 SMART LRR_typ_2 498 522 IPR003591 -
Vivi1g02669 1008 Gene3D Phosphorylase Kinase; domain 1 655 767 - -
Vivi1g02669 1008 Gene3D Ribonuclease Inhibitor 356 618 IPR032675 -
Vivi1g02669 1008 Gene3D Ribonuclease Inhibitor 17 78 IPR032675 -
Vivi1g02669 1008 Gene3D Transferase(Phosphotransferase) domain 1 768 989 - -
Vivi1g02669 1008 MobiDBLite consensus disorder prediction 965 1008 - -
Vivi1g02669 1008 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 659 767 - -
Vivi1g02669 1008 SUPERFAMILY L domain-like 300 615 - -
Vivi1g02669 1008 ProSitePatterns Serine/Threonine protein kinases active-site signature. 812 824 IPR008271 GO:0004672|GO:0006468
Vivi1g02669 1008 Gene3D Ribonuclease Inhibitor 79 349 IPR032675 -
Vivi1g02669 1008 ProSiteProfiles Protein kinase domain profile. 690 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02669 Vivi-Chr1 56770575 56773995 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02669 23 975 Receptor kinase-like Gene Family AT5G65700 81.230 0.0 1574
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Vivi1g02669 Pkinase 1.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02669 - - gmx:100499646 1655.19