Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02652 ATGGCTTCTATTTCAATGGAGAGTTTGGGGTCGAGCGAAGATGATGAACCAACACTTAATACTACACAAGGTGTTCATATACTAAAATCGGTGCAGACAAATCAAGAGGTTCTAAATTGTGACGAAGAAATCAAACCTAAAGTAGGACAACTTTTTGATTCACTTGAAGATGGTGAAATTTTTTACAAAAAATATGCACACACTGTTGGATTTAGTGTGCGTTGCTCATCAGAAAATAAAAATAAAGATGGTGTTGTACGTTGGAAGTATTTTGTTTGCTCAAAAGAGGGTTACAACCCAAATGTATCAAAAGACAAAGAAGTGACTGAATCAGGAGTTAAACTCAAGAGGAGAAGTCTTACTAGAGAAGGATGTGAGGCAAAAGTTGCTTTCAAACTATTAGAGGGAGGTAAGTATGAGCTAACTCGATTTCAAGAAAGTCATACTCATGTACTTGCCTCTCCTAAAAAGAGACAATTTCTTAGATCGGCAAGAAAAGTGAATCATATTCATAAGAGTATAATGTATGCAAATAGTAGAGCAAATATTGGTCCTTCAAAAACATACCACTTGTTGAAGGAACAACTAGGTGGTTATGAAAATATTGGGTGCACACAGAGAGATCTACAAAATTGTTTTAGAGATTTAAAGACCTTAATTAAAGATTCGGATGCATATGTCTTCATTGATAACTTTAAAAGGAAGCAAGAAATGAATCCATCATTTTATTTTGCATATGAGGTTGATGTTGAAGATCGGTTGAAATATGTTTTCTGGGCAGATGGAATTTGTAGAAAAAATTACTCCTTATTTGGAGATGTGATGTCGTTCGACACTACATATGAAACAAATAGGTTTTGTATGTGGCATATCATGAAAAAAGTTTCTGAAAAGGTGGGTGTTTCCTTGAATTCCAATGATGATTTCAACAATAAATTTAAGTCATGTGTTTGGGGATCAGATACTCCCGACAAATTTGAAGCAACGTGGAAATCCATCATGATTGAGTTTGGATTGGAAAAGAATGAATGGCTTTCACACATGTATAATATTCGAAATATGTGGATCCCAGCTTACTTCAGAGATATATTTTTGGGTGGCATATTGAGAACAACCTCAAGATCAGAAAGTGAAAATTCCTTCTACGGTAACTTTTTAAATCCTACTATTGGTTTGGTTGAATTTTGGATGAGATTTGAGTCTGCTATAGAAGCTCAAAGACATAAAGAGTTACTTGCTGATAATACTTCACTTCACTCTTTACCAATATTAAAATTAAATCGTGGACTAGAGAGGCATGGTAGAGATATTTACACTCGTGAAAACTTTTATATATTTCAAAATGAATTATGGATTGGATGTATAGACTGCGGAGTAGAAAATATAAACCAAAAAGATGGTGTGGATGTATTGCATATAGTTGATAATAGTGAAACAAATGGTAAAGTAAGCGAGTCTTTTATTGGTTTTGATATTCCTAAAGAAGTGAAAATTCATCCACCACAAATTTCAAAGACAAAAGGAAGTGGTAAACGAATTAAAGGAGGAAAAGAAAAGGCTATTGAACAACAACAAAAAAGATCCAGGCTTTGTAAAGCATGTGGCCAATATGCATATCATGATACTCGTAATTGTCCTACGAAATCATCTGCCTAA 1656 0.34 MASISMESLGSSEDDEPTLNTTQGVHILKSVQTNQEVLNCDEEIKPKVGQLFDSLEDGEIFYKKYAHTVGFSVRCSSENKNKDGVVRWKYFVCSKEGYNPNVSKDKEVTESGVKLKRRSLTREGCEAKVAFKLLEGGKYELTRFQESHTHVLASPKKRQFLRSARKVNHIHKSIMYANSRANIGPSKTYHLLKEQLGGYENIGCTQRDLQNCFRDLKTLIKDSDAYVFIDNFKRKQEMNPSFYFAYEVDVEDRLKYVFWADGICRKNYSLFGDVMSFDTTYETNRFCMWHIMKKVSEKVGVSLNSNDDFNNKFKSCVWGSDTPDKFEATWKSIMIEFGLEKNEWLSHMYNIRNMWIPAYFRDIFLGGILRTTSRSESENSFYGNFLNPTIGLVEFWMRFESAIEAQRHKELLADNTSLHSLPILKLNRGLERHGRDIYTRENFYIFQNELWIGCIDCGVENINQKDGVDVLHIVDNSETNGKVSESFIGFDIPKEVKIHPPQISKTKGSGKRIKGGKEKAIEQQQKRSRLCKACGQYAYHDTRNCPTKSSA 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02652 551 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 40 472 IPR031052 GO:0006355
Vivi1g02652 551 MobiDBLite consensus disorder prediction 501 523 - -
Vivi1g02652 551 Pfam FAR1 DNA-binding domain 61 152 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02652 Vivi-Chr1 56128943 56131279 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi1g02652 FAR1 4.1e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02652 - - vvo:131642960 1138.25