Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02646 ATGGCTGCTACATCTGGGATAGCTTTAGAGGAAACACAAGTGTCTTCCAGTGACGAGATCAATCCGAGGCTGGATGTCTATGTGTGGGACATGGATGAGACCCTTATACTTCTCAATTCCTTGCTGAAATCATCGTATGCCGAGGCTTTTAACGGTCTGAAGGATGTGCAGAAAGGTGTCGAGCTTGGGAGGATGTGGGAAAATCTCATTCTGCAATTGTGTGATGATAATTTCTTCTACGACCAAATTGAGAATTACAATAAGCCGTTTCTTGATGTTATGTCCAAATATGATGATGGGAGGGACCTATCTGATTATGACTTCAACAAAGATGAATTAGGCCCCCCACATGATGATGTCAACAAAAGAAAACTTGCGTATAGGCATCGAGTTATAGCCCAAAAATACTTGCAGGGTTTACATAATATTTTAGATCGTGAGACAATAAAAGCATGGGATGATTTGTATAGTAAAACTGATGAATATACTGACAAATGGCTTTCATCAGCACGGGCCTTTTTGGAAGAGTGTTCCGATGAAAAGAAAGATGTGGTTTCTTCCACCGCTTATGGTAACACAAGCACTGACTCAACTAATGCAAAACATCAGCGTGTAAATGTTCTGGTGACATCTGGATCGTTGATACCATCTCTGGTAAAATGCATACTCTTTCATCTCGACAGCTTAATAACACATGAAAATGTGTATAGTTCCTGGGATGTGGGGAAAACTCAATGTTTTCGATGGATCAAGGAGCGTTTCAACCATCCCAATGTTCGCTTTTGTGTAATTGGAGATGGATGGGAAGAATGTGAAGCTGCAGAAATCATGAGATGGCCATTTATTAAGATTGACCCCCGGCCAGGAAAACCTCATAGGTTCCCTGGTCTCACATCCAAAACAGTTGGCCACTATTTTTCTGTGGTTTATCCAAACAACAAGAATGATGAAGAATGA 957 0.4096 MAATSGIALEETQVSSSDEINPRLDVYVWDMDETLILLNSLLKSSYAEAFNGLKDVQKGVELGRMWENLILQLCDDNFFYDQIENYNKPFLDVMSKYDDGRDLSDYDFNKDELGPPHDDVNKRKLAYRHRVIAQKYLQGLHNILDRETIKAWDDLYSKTDEYTDKWLSSARAFLEECSDEKKDVVSSTAYGNTSTDSTNAKHQRVNVLVTSGSLIPSLVKCILFHLDSLITHENVYSSWDVGKTQCFRWIKERFNHPNVRFCVIGDGWEECEAAEIMRWPFIKIDPRPGKPHRFPGLTSKTVGHYFSVVYPNNKNDEE 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02646 318 FunFam Eyes absent homolog 25 294 - -
Vivi1g02646 318 Gene3D - 25 290 IPR038102 -
Vivi1g02646 318 PANTHER EYES ABSENT 18 306 IPR028472 GO:0004725
Vivi1g02646 318 NCBIfam EYA conserved domain 25 302 IPR006545 GO:0007275
Vivi1g02646 318 SUPERFAMILY HAD-like 28 288 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02646 Vivi-Chr1 56053942 56057849 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02646 24 316 Protein tyrosine phosphatase (PTP) family AT2G35320 60.410 3.24e-137 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02646 - - tpra:123881555 590.497