Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02636 ATGGGAAGTGGAGTCTCGAGCCTGTGTTCTTGCTTAGAACCGGTTCACCGGACCAAACGAACCCAACAAAAAGACGATTTATTCACTGCAACTGAACCCTTGGATGAAACCCTAGGTCATTCTTTCTGTTACGTTAGATCTTCAGCTCGTTTTCTCTCTCCTTCTCACTCCGATCGCTTTCTCTCACCTTCTACTTCTCTTCGTTTCTCACCTACCCATGAATCTCTTCCTAAAACCCGACCCGATTTTCCCGAAACTTCTTTTAAGGCCATTTCTGGTGCTTCTGTTAGTGCCAATAGTTCGGTTCCGAAAGCGGTTATTCAGTTGGAGGAAGAATCCTCCGCTGCGGTTGATTCTGGTGGCGGTGTTGGTAAGGGTATAGTTGTCAATGGCTTTGAGAGTACGTCGTCGTTTTGTGCTCTTCCGCTTCAGCCTGTTCCGAGAGGTGGTGAGCTTTTCGAGGGGAGTGGTTTTTTTCTCTCCGGTCCGATTGAGAGCGGCGCGCACTCTGGACCGATTAACGCAGGTTCTGCGGCTGATTCGGGTGTTTCCGGTGGAAGGGATGTTCCTTTCTCGGCGCCGTTAGGGGGGATGTATGGGAGGAAGAGAGGTGTATCGGGGTTTAGGAAGGCGTTTCAACGGAAGGTGTCGGAGAAGAAGCGGCCGTGGGTGGTGCCGGTGTTGAACTTTGTTGGGAGGAAGGAGGTTTCGGGGAGTGAAGGGAAGGGGAAGCCTGTTGAGGCAAAGAGTGAGAGCAATGTGCAGTGGGCTCTAGGGAAAGCGGGAGAGGATCGGGTTCATGTGGTGGTTTCGGAGGAGCAAGGGTGGTTGTTCGTTGGGATTTATGATGGTTTCAATGGTCCTGATGCGCCGGAGTTTTTGATGGGTCATATGTACCGTGCTGTTCACAATGAGCTTCAGGGTTTGTTTTGGGAAGTTGAAGAACCGATAGAGAATCATAGTTCTGTTGAGGTGAAAAACAAACCGGAGGGAGAAAATTCAAGTGCTGGTTTGGTACAAAGGACTGAAACTGCTCCTGTGGCAGGGACGGAGAGTAAACGGCGTAGGCTGTGGGAATTTCTGGCTGAAGACCCTGAAGATGGACTTGATCTTTCTGGGTCTGATAGGTTTGCATTTTCTGTTGACGATGCACTTAGTGTTAGTAATAATACCAATGCAGGTTCTGCCAGTAGTAGACGGTGGCTGTTGCTGTCCAAACTCAAGAATGGTTTGTCTTCTAAGCAAAAAGAGGGTAATGGTAGGAAGTTGTTGCCGTGGAATTTAGGGAATGAGGAAGAGAAGGGAGAAAAGACTGAGGTGGAAAACAAGCCTTCTGCGTCTGGCATTGATGGTGGGAGAAGACGGAAGTTGGGTCCAGTTGATCATGATTTGGTTTTGAATGCAATGTCCCGGGCGCTACAAGTGACAGAGCTTGCATATTTGGATATGACCGATAAGCTTCTGGATACAAATCCTGAACTTGCTCTGATGGGTTCTTGTCTGTTGGTTGCTTTGATGAGGGATGAGGATGTGTATGTGATGAATGTTGGGGATAGTCGTGCAATTGTTGCACATTATGAGCCCAAGGAGGTTCAGGATACTTCCAATGTGGAATCTGCAAGCAAGGGAGGAGATGTTGGTGTTGGTTCGAGCACCGAGAGCATAGTTGAGGAGTCCTTTGCTATAGATGGTACTCAAACTGAAGGTGCAATCAATTTGGGGAATCAGGATCCTGCTCAAGAAATGAGGTTGGCAGCATTGCAGCTGTCTACTGACCACAGCACCAGCATTGAAGAAGAAATCATTAGAATTAAGAATGAGCATCCTGATGATCCCCATTGCATAGTCAATGATAGAGTTAAAGGCCGTCTTAAGGTCACCAGAGCATTTGGGGCTGGATCTTTGAAACTGCCAAAGTTGAATGCTGCAGTACTGGAAATGTTTCGTAATGATTATATTGGCACTGCTCCATACATATCATGCATCCCTTCACTACGGCACCATAGATTATGCCCAAAGGATCAGTTCTTGATCCTCTCATCTGATGGTTTGTATCAATATCTAAACAATGACGAAGTTGTTTCTCAAGTTGAGAGCTTTATGGAAAAGTTTCCAGAAGGAGACCCTGCCCAGCATTTAATAGAAGAGCTGCTCCTCCGTGCAGCCAAGAAGGCTGGAATGGATTTTCATGAGTTGCTGGATATTCCGCAAGGAGATCGGAGGAAGTATCACGATGACGTTACTGTTATGGTGATATCACTTGAAGGAAGAATATGGAAATCGTCAGGGAAATATCTGTGA 2301 0.4715 MGSGVSSLCSCLEPVHRTKRTQQKDDLFTATEPLDETLGHSFCYVRSSARFLSPSHSDRFLSPSTSLRFSPTHESLPKTRPDFPETSFKAISGASVSANSSVPKAVIQLEEESSAAVDSGGGVGKGIVVNGFESTSSFCALPLQPVPRGGELFEGSGFFLSGPIESGAHSGPINAGSAADSGVSGGRDVPFSAPLGGMYGRKRGVSGFRKAFQRKVSEKKRPWVVPVLNFVGRKEVSGSEGKGKPVEAKSESNVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDAPEFLMGHMYRAVHNELQGLFWEVEEPIENHSSVEVKNKPEGENSSAGLVQRTETAPVAGTESKRRRLWEFLAEDPEDGLDLSGSDRFAFSVDDALSVSNNTNAGSASSRRWLLLSKLKNGLSSKQKEGNGRKLLPWNLGNEEEKGEKTEVENKPSASGIDGGRRRKLGPVDHDLVLNAMSRALQVTELAYLDMTDKLLDTNPELALMGSCLLVALMRDEDVYVMNVGDSRAIVAHYEPKEVQDTSNVESASKGGDVGVGSSTESIVEESFAIDGTQTEGAINLGNQDPAQEMRLAALQLSTDHSTSIEEEIIRIKNEHPDDPHCIVNDRVKGRLKVTRAFGAGSLKLPKLNAAVLEMFRNDYIGTAPYISCIPSLRHHRLCPKDQFLILSSDGLYQYLNNDEVVSQVESFMEKFPEGDPAQHLIEELLLRAAKKAGMDFHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYL 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02636 766 PANTHER PROTEIN PHOSPHATASE 2C 248 753 IPR015655 GO:0004722|GO:0006470
Vivi1g02636 766 MobiDBLite consensus disorder prediction 54 83 - -
Vivi1g02636 766 SMART PP2C_4 247 752 IPR001932 -
Vivi1g02636 766 MobiDBLite consensus disorder prediction 412 455 - -
Vivi1g02636 766 Pfam Protein phosphatase 2C 587 722 IPR001932 -
Vivi1g02636 766 SUPERFAMILY PP2C-like 259 755 IPR036457 -
Vivi1g02636 766 CDD PP2Cc 461 754 IPR001932 -
Vivi1g02636 766 Gene3D - 235 761 IPR036457 -
Vivi1g02636 766 ProSiteProfiles PPM-type phosphatase domain profile. 247 754 IPR001932 -
Vivi1g02636 766 MobiDBLite consensus disorder prediction 54 73 - -
Vivi1g02636 766 MobiDBLite consensus disorder prediction 427 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02636 Vivi-Chr1 55905741 55912033 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02636 1 766 PP2C-type Phosphatase Gene Family AT2G35350 56.543 0.0 793
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02636 - - mtr:11415473 1223.38