Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02616 ATGCATCAAAACTATTGTGAAAGAAACATTAAATCAACCATGTCATCAGCTATAACTTTGAAAGGTTGTTACACTGTGAAACCAATAGAACCAACATGGAGTGGCTGTATATCATTAACAGAATGTGATCAAGTTGGATTCATGACCCATGTTCCACTTCTTTACTTTTACCGCCCCCCACAAAACTGGCTTACCTCCCCCACTAAAATTGCCACCATTTTGAAACACTCACTAAGTAGAGTTTTGATGCATTTTTATCTACTTGCTGGTCGTTTACGATCGAAAGAAAATTTTCGTTTTGACTTGGAATGCAACGCAAAGGGTGTTGAGTTCATTGAAGCAGAATCCTCATCAACATTATCTGATCTAGGTGACTTTTCATCTTCTTCAAACAATTACTATCGTTACCTTTTCCCGCACGTTGACTACACGCTCCCAATTCACGAGCTTCCTTTGCTTTTGATTCAACTCACCAAATTCAAATGTGGTGACATTAGCATTAGTGTGTTAATCTCACATGCTGTTGTCGATGGACAAAGTACGTCGCATTTTCTCAATGAGTGGGCTCAGCTTGCACGGGGAGAGCCTTTGAAAAGGGTTCCATGTCTTGATAGAACCATGTTACATGGTAAGAAACCATGCAATAGTGTTAATGAGTGGAAGTTTAATGAACCTCCGGTTTTGTTGGGAAATTCAGATGGTAAGGTTGAAGAAAGCAAGAAAAAAACAAGGGTGGAAAAAATCAAATTAAATAAAGCACAAGTTGAAAAGTTGAGAAAAATAGCGAATGAGAGTTGGAATAAACATAGTAATGATCGAGGTTTTTCAAGATATGAAACGATAGCCGGTCATATGTGGAGAAGTGCATGTAAAGCTAGAGGGCATAAAAATGAGCAACCAACCATGCTCGGTGTCATTGTTGACTGGAGAAGTCGTGTGAAACCTAGTTTACCAAAAGAGTATTTTGGAAATGCTGTATATGATCTAATGGCTACTAGTCTTGCTGGTGATTTGATCTCTAAGCCATTAGGGTATGCTTCAAGTAAGATAAAGGAAACAATTGAGAAAATGAATGATGAATATGTGAGGTTGATGACTGAGTACTTAAAGAAGCTAGATGATTTGACTAACTTTCAAAATCTTCATGAGATTGTGAGTGGTAATATTGTGCCTTTTTATCAAAATCCTAATTTAGGAGTGGTTAGTTGGTTGACATTGCCATTTCACAAACTTGATTTTGGATGGGGGAATGAGCTTTATATGGAGCCAGGAATACATGACATGCTTGAAGGAGAATCATTCATTCTTCCTAGTTCTCATGATGATGGATCTTTGATGATTTATATTTGCTTGCAAGAGGTCTATATGGATGCCTTTAAAAGACATTTTTATGAAGATCTTGAGCTGGAGACTCTGTCAAAGTTGTAA 1428 0.3754 MHQNYCERNIKSTMSSAITLKGCYTVKPIEPTWSGCISLTECDQVGFMTHVPLLYFYRPPQNWLTSPTKIATILKHSLSRVLMHFYLLAGRLRSKENFRFDLECNAKGVEFIEAESSSTLSDLGDFSSSSNNYYRYLFPHVDYTLPIHELPLLLIQLTKFKCGDISISVLISHAVVDGQSTSHFLNEWAQLARGEPLKRVPCLDRTMLHGKKPCNSVNEWKFNEPPVLLGNSDGKVEESKKKTRVEKIKLNKAQVEKLRKIANESWNKHSNDRGFSRYETIAGHMWRSACKARGHKNEQPTMLGVIVDWRSRVKPSLPKEYFGNAVYDLMATSLAGDLISKPLGYASSKIKETIEKMNDEYVRLMTEYLKKLDDLTNFQNLHEIVSGNIVPFYQNPNLGVVSWLTLPFHKLDFGWGNELYMEPGIHDMLEGESFILPSSHDDGSLMIYICLQEVYMDAFKRHFYEDLELETLSKL 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02616 475 Gene3D - 13 223 IPR023213 -
Vivi1g02616 475 Gene3D - 232 466 IPR023213 -
Vivi1g02616 475 FunFam Tryptamine hydroxycinnamoyl transferase 230 464 - -
Vivi1g02616 475 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 26 463 - -
Vivi1g02616 475 SUPERFAMILY CoA-dependent acyltransferases 129 195 - -
Vivi1g02616 475 Pfam Transferase family 18 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02616 Vivi-Chr1 55330651 55332285 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02616 18 465 Monolignol Biosynthesis Gene Families AT5G48930 36.667 6.76e-96 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02616 K13065 - gmx:100777532 521.546