Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02615 ATGGTTGATCTTACTCCACCACCTCCTGCTCCAGTTTCAAATGAAAGCTACAATTCTAAACCTCCCATCTTTAATGGTAATGATCAAGTAAAGGAAACCAAGGCGCTGGCCTTGATTCAGAAGTATGAAGCTTTCAAAATGGAAGATGAAGAAACTATTGAGACGATGTTCTCAAGATTTCAAACCTTAGTTGCAAGACAAAGAGTTCTGAATAAAGGATACTCCACCTCAGATCACATAAAGAAAATTATCAGAAGCTTTACATCTAAATGGAGGCCTGTGGTAACTGCACTTAAGCTTACAAAAGATCTGAATAACACTTCTCTAGAGGAAATGGTGAGTTCTCTAAGAAGTCATGAGATTGAGCTAGAACAAGATCAACCTCAGAAGAAGGTAAAATCTATTGCACTCAAATTTGTCACAAGTTCTGAGAAGTCCATGGCTCTTCAAGCCAAAGAGATCGAGGATTCTGACGAAGATTCTAATGGTATCGAAGATGATTTGTTTCTGCTATCTAGAAGGGTTAACCTTCTCTGGAAGAGAAATCAAGGAAACAAGTTCAGAGGTTTTAGAATGACTGATGGTCGCTTAGAGTCTACTTCTGACCAAAGAAAGTCTAGTGGCAAAGAAGTCATTTGTTATGAATGCAACAAGGCGGGACACCTCAAGTACGGATATCCTGAACTACAGAAGGACAATTCCAAGAAGAAAGCTTTACAAAGCAAGAAGAAAAGGTTGATGGCAACTTGGGAAGACTCTGACTCCTTAGAAGATGAGTCTCAAGAAGATCAGGCCAACATAGCTCTAATAGCTTGCGTAGGAACTTCAGAAGCAGAGATCCCTTCAAAAGGCAAAGCTGGCTCAGAATCAGGTGAAGAAGAGGTAACCCTCAAAGAGGTATTTTCTGATCTTTCTCATTTAAAATTGTGTACATCCTTAACCGAAATTCTGAAAAGACATGAGTTACTCAAGATTGATTTCAAAGAACTTAAAAAATCCCATGAATTCATATCTTTTGAAAAAAGCAAGGTTAAGGAATATCTCTTTATTTTAAATGAAGATATTTTCTTTCTTAAAGATGAGAACTTTTCACTCAAAGGCACGAGAGATCCTCCAGAAGCTTCCGAGAGTACTGATTATGTCATTAAAAAATATGACAAAGCTTTTCAAAAGTTCCTATTCAGAAGCATAGGGAGAAGCACGTTGGCTTCTTTGATATATGGCGTAAGCAAAAATGGGGCAGATGTCTCACAAACTAAACAACAGAACCTTTGTAAGAGAAACATTAAATCAAGCATGTCATCATCTTCATCAATGACATTGAAAGATTCTTACATTGTTACACCAAAGGAACCAACATGGTGTGGTTGTTTACCATTATCCGAATGGAGTCAAGTAGGAATGATAACTCACGTTCCACTTATTTACTTTTACCGCCCCCCGCCAAATTGGCTTATCCCCCCTACTAAAATTGCCACCACCTTGAGACACTCATTAAGCAAAATTCTAGTTCAATTTTATCCACTTGCTGGTCGTTTACAAAGGAAAAGTAATGGTCGTTTTGATCTAGAATGCAATGCAATGGGTGTTCAATTCATGGAAGCTGAAACATCGTTAGCATTATCTGATCTCGGTGATTTTTCACCTTCTTCGAATGATTATTGCCATTACCTTTTCCCGCGCGTTGACTATACGCTCCCAATGCAAGAGCTTCCTTTGCTTATTGTTCAACTCACAAAATTCACATGTGGTGGCATTAGCATTAGTTTCTTAATCTCTCACATAGTTAGTGATGGACAGAGTGTGACGCATTTCATTTTTGAATGGGCTCAACTTGCACGTGGAGAATCTTTGAAAAGGGCGCCATTTCTCGATAGAAATGTGTTGCATGGTGGAGAACCATGCAATAATGCCAGCGGATGGGAGTATAATCAACTACCGCTTTTGTTGGAAAATTTGGATAGTAATGTTGATGAAAGGAAGGAGAAAACAAAAAATGCTATACTCAAAGTGAGTGAAAAACAAGTTGAAAAGTTGAGAAAAATAGCGAATGAGAGTTGGAATAAATCTAGTAATGATCGAGATTATTCAAGGTATGAAACGATAACCGCTCATATTTGGAGAAGTGCATGTAAAGCTAGAGGCCATAAAAATGACCAACCAACTGCGATTGGTGTTTGTGTTGATTGGAGGAGTCGCGTTAAACCTAATTTACCAAAAGAGTATTTTGGAAATGCAATATTAGATGTGTTGGCTACTAGTATGGCTGGTGATTTGATGTCTAAGCCATTAGGATATGCTTCAAGTAGGATAAGAGAAGCAATAGAGCAAGTAAATGATGAGTATGTGAGGTTGGGGGTTGAGTATTTTAAAAAGCAACATGATTTGACTAAGTTTCAAGATATTCATGATATAGGGAGTGGTGAAGAGGTGTCTTTTTATCGAAATCCTAATTTAGGGGTGGTTAGTTGGTTGGAATTACCAATTTATGGAATGGATTTTGGATGGGGAAAAGAGATTTATATGGGGCCAGGATTTCATGAAGAACTTGAGGGAGACTCGTTGATTCTTCCTAGTCCTCATGATGATGGGTCTTTGTTGATTTATATGTGTCTGCAAGAGGACCATATGGATAAATTTAAGAGACATTTTTATCAAGGTGCTGAGTTTGAATTCCTTCAAGGACGATTGTAA 2694 0.3801 MVDLTPPPPAPVSNESYNSKPPIFNGNDQVKETKALALIQKYEAFKMEDEETIETMFSRFQTLVARQRVLNKGYSTSDHIKKIIRSFTSKWRPVVTALKLTKDLNNTSLEEMVSSLRSHEIELEQDQPQKKVKSIALKFVTSSEKSMALQAKEIEDSDEDSNGIEDDLFLLSRRVNLLWKRNQGNKFRGFRMTDGRLESTSDQRKSSGKEVICYECNKAGHLKYGYPELQKDNSKKKALQSKKKRLMATWEDSDSLEDESQEDQANIALIACVGTSEAEIPSKGKAGSESGEEEVTLKEVFSDLSHLKLCTSLTEILKRHELLKIDFKELKKSHEFISFEKSKVKEYLFILNEDIFFLKDENFSLKGTRDPPEASESTDYVIKKYDKAFQKFLFRSIGRSTLASLIYGVSKNGADVSQTKQQNLCKRNIKSSMSSSSSMTLKDSYIVTPKEPTWCGCLPLSEWSQVGMITHVPLIYFYRPPPNWLIPPTKIATTLRHSLSKILVQFYPLAGRLQRKSNGRFDLECNAMGVQFMEAETSLALSDLGDFSPSSNDYCHYLFPRVDYTLPMQELPLLIVQLTKFTCGGISISFLISHIVSDGQSVTHFIFEWAQLARGESLKRAPFLDRNVLHGGEPCNNASGWEYNQLPLLLENLDSNVDERKEKTKNAILKVSEKQVEKLRKIANESWNKSSNDRDYSRYETITAHIWRSACKARGHKNDQPTAIGVCVDWRSRVKPNLPKEYFGNAILDVLATSMAGDLMSKPLGYASSRIREAIEQVNDEYVRLGVEYFKKQHDLTKFQDIHDIGSGEEVSFYRNPNLGVVSWLELPIYGMDFGWGKEIYMGPGFHEELEGDSLILPSPHDDGSLLIYMCLQEDHMDKFKRHFYQGAEFEFLQGRL 897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02615 897 MobiDBLite consensus disorder prediction 1 26 - -
Vivi1g02615 897 FunFam Tryptamine hydroxycinnamoyl transferase 651 885 - -
Vivi1g02615 897 MobiDBLite consensus disorder prediction 1 15 - -
Vivi1g02615 897 Pfam gag-polypeptide of LTR copia-type 32 124 - -
Vivi1g02615 897 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 446 882 - -
Vivi1g02615 897 Pfam Transferase family 439 885 - -
Vivi1g02615 897 Gene3D - 653 886 IPR023213 -
Vivi1g02615 897 Gene3D - 434 642 IPR023213 -
Vivi1g02615 897 Coils Coil 229 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02615 Vivi-Chr1 55322367 55329475 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02615 439 886 Monolignol Biosynthesis Gene Families AT5G48930 38.581 1.78e-99 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02615 K13065 - gmx:100777007 532.332