Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02611 ATGCATCAAAACCAGTGTGAGAGAAACATTAAATCAACCATGTCATCATCTATCACTTTGAAAGGTTGTTACACTGTGAAACCAATAGAACCAACATGGAGTGGCTGTTTATCATTAACAGAATGTGATCAAGTTGGAATCATAACCCATGTTCCACTTATTTACTTTTACCGCCCGCCACAAAACTGGCTTACCTCCCCCACTAAAATTGCCACCATTTTGAAACACTCACTAAGCAGAGTCTTGATGCATTTTTATGTACTTGCTGGTCGTTTACGATCGAAAGAAAATTGTCATTTTGACTTGGAATGCAATGCAAAGGGTGTTGAGTTCATTGAAGCAGAATCCTCATCAACATTATATGATCTAGGTAACTTTTCACCTTCTTCAAACAATTACTATCGTTACCTTTTCCCGCACGTTGACTACACGCTCCCAATTCACGAGCTTCCTTTGCTTTTGATTCAACTCACCAAATTCAAATGTGGAGACATTAGCATTAGTGTGTTATTCTCACATGCTGTTGTCGATGGACAAGGTTTGTCGCATTTTCTTAATGAGTGGGCTCAGCTTGCACGGGGAGAGCCTTTGAAAAGGGTCCCGTGTCTTGATAGGACCATGTTACATGATAAGAAACCATGCAATAGTGTTAATGAGTGGATGTTTAATGAACCTCCGCTTTTGTTGGGAAATTCAGATGGTAAGGTTGAAGAAAGCAAGAAAAAAACAAGGGTGGGAAAAATCAAATTAAATAAAGCACAAGTTGAAAAGTTGAGAAAAATAGCGAATGAGAGTTGGAATAAACATAGTAATGATCGAGGTTTTTCAAGATATGAAACGATAGCCGGTCATATGTGGAGAAGTGCATGTAAAGCTAGAGGGCATAAAAATGAGCAACCAACCATGCTCGGTGTGACTGTTGACTGGAGAAGTCGTGTGAAACCTAGTTTACCAAAAGAGTATTTTGGAAATGCTGCATATGATATAATGGCTACTAGTCTTGCTGGTGATTTGATGTCTAAGCCATCAGGGTATGCTTCAAGTAAGATAAAGGAAACAATTGAGAAAGTGAATGATGAATATGTGAGGTTGATGAGTGAGTACTTTAAGAAGCTAGATGATTGGACTAACTTTCAAAATCTTCATGAGATTGTGAGTGGTAATATTGTGCCTTTTTATCAAAATCCTAATTTAGGAGTGGTTAGTTGGTTGACATTGTCATTACACAGACTTGATTTTGGATGGGGGAATGAGCTTTATATGGAGCCAGGAATACATGACATGCTTGAAGGAGAATCATTCATTCTTCCTAGTTCTCATGATGATGGATCTTTGATGATTTTTATTTGCTTGCAAGAGGTCTATATGGATGCCTTTAAAAGACATTTTTATGAAGATCTTGAGCTGGAGAATTTGTCAAAGTTGTAA 1428 0.3789 MHQNQCERNIKSTMSSSITLKGCYTVKPIEPTWSGCLSLTECDQVGIITHVPLIYFYRPPQNWLTSPTKIATILKHSLSRVLMHFYVLAGRLRSKENCHFDLECNAKGVEFIEAESSSTLYDLGNFSPSSNNYYRYLFPHVDYTLPIHELPLLLIQLTKFKCGDISISVLFSHAVVDGQGLSHFLNEWAQLARGEPLKRVPCLDRTMLHDKKPCNSVNEWMFNEPPLLLGNSDGKVEESKKKTRVGKIKLNKAQVEKLRKIANESWNKHSNDRGFSRYETIAGHMWRSACKARGHKNEQPTMLGVTVDWRSRVKPSLPKEYFGNAAYDIMATSLAGDLMSKPSGYASSKIKETIEKVNDEYVRLMSEYFKKLDDWTNFQNLHEIVSGNIVPFYQNPNLGVVSWLTLSLHRLDFGWGNELYMEPGIHDMLEGESFILPSSHDDGSLMIFICLQEVYMDAFKRHFYEDLELENLSKL 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02611 475 SUPERFAMILY CoA-dependent acyltransferases 129 195 - -
Vivi1g02611 475 Gene3D - 232 466 IPR023213 -
Vivi1g02611 475 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 26 463 - -
Vivi1g02611 475 Pfam Transferase family 17 465 - -
Vivi1g02611 475 Gene3D - 13 221 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02611 Vivi-Chr1 55007591 55009201 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02611 18 465 Monolignol Biosynthesis Gene Families AT5G48930 35.778 8.51e-92 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02611 K13065 - gmx:100777532 508.064