Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02608 ATGTCATCTTCATCTATAACTTTGAAAGGTTCTTACACTGTGAGACCATCAGAACCAACATTAAGCGAATGGGATCAATTTGGAATTATAACCCATGTTCCAACTATTTACTTTTACCGCCCCCCACAAAATTGGCTTACTCCTCCCATTAAAATTGCCACCACTCTGAAAGATTCACTAAGCAAAGTTCTGGTGCATTTTTATCCACTTGCTGGACGTTTACAATGGAAAACGAATGGTCGTTTTGAATTGGAATGCAATGCAAAGGGTGCTCAGTTCATCGAAGCGGAATCCTCGTCAACATTATCCGATTTCCGTGACTTTTCATCTTCTTCAAAAAATGATTACCGCAACCTTTTTCCATTTGTTGATTACACACTCCCGATTGAAGAACTTCCATTGGTTATTATTCAGCTCACGAATTTCAAATGTGGAGGCATTAGCATTAGTATGTTAGTCTCACATGCGGTTGTTGATGGACGAAGTGCATCCCATTTCTTTTGTGAATGGGCTCAACTTGCACGTGGAGAGCCTTTGAATAGGGTTCCGTTTCTCCATAGCAACATGTTAAATGATGGGAAACCATGCAATGGTGTTAAAGAGTGGAATTTTAGTGAGCTTCCGGTTTTGCTGGGAAATTTAAAAAGTAACGTTGAGAAAAAAAGGAACAAAACAACTGTTGCTAAAGTCAAAGTTAGCAAAATACAAGTTGAAAAATTGAGAAAAATAGCGAATGAGAGTTGGAATAAGTCTAGCAATGATCGAAGTTATTCAAGGTATGAAACGATAACTGGTCATCTTTGGAGAAGTGCGTGTAAAGCTAGAGGGCATGAAAATGACCAACCAACTTGGCTCGGCGTAAGTGTTGATTGGAGGAGTCGTGTAAAACCTAATTTATCTAAAGAGTATTTTGGGAATGCGACAATGGATGTGATGGCTACTAGTCTTGCAGGTGATTTGATATCTAAGCCATTAGGATATGCTTCGAGTAGGATAAGGGAAGCAATTGAGAAGGTGGATGATGAGTATGTGAGGATGGTGAGTGAGTGCATTAAGAAACAAGATGATTTGACTAAGTTTCAAAATTTGGATGAAGTAGTAAGTGGTAACATTGTTCCTTTTTATAAAAATCCTAATTTAGGAGTGATTAGTTGGTTGACATTGCCGTTACACGGACTTGATTTTGGATGGGGGAAGGCGGTTTATATGGAGCCAGGAATACATGAGATATATGAAGGAGAATCGTTGATTCTTCCTACTCTTCATGATGACGGATCTTTGTTGATTTTTATTTGTTTGCAAGAGGTTTATATGGATGCTTTTAAAATATATTTTTATGAAGGTATTGAGTTGGACACAGTTGTAAAATGA 1371 0.38 MSSSSITLKGSYTVRPSEPTLSEWDQFGIITHVPTIYFYRPPQNWLTPPIKIATTLKDSLSKVLVHFYPLAGRLQWKTNGRFELECNAKGAQFIEAESSSTLSDFRDFSSSSKNDYRNLFPFVDYTLPIEELPLVIIQLTNFKCGGISISMLVSHAVVDGRSASHFFCEWAQLARGEPLNRVPFLHSNMLNDGKPCNGVKEWNFSELPVLLGNLKSNVEKKRNKTTVAKVKVSKIQVEKLRKIANESWNKSSNDRSYSRYETITGHLWRSACKARGHENDQPTWLGVSVDWRSRVKPNLSKEYFGNATMDVMATSLAGDLISKPLGYASSRIREAIEKVDDEYVRMVSECIKKQDDLTKFQNLDEVVSGNIVPFYKNPNLGVISWLTLPLHGLDFGWGKAVYMEPGIHEIYEGESLILPTLHDDGSLLIFICLQEVYMDAFKIYFYEGIELDTVVK 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02608 456 Gene3D - 214 448 IPR023213 -
Vivi1g02608 456 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 14 442 - -
Vivi1g02608 456 Pfam Transferase family 5 444 - -
Vivi1g02608 456 Gene3D - 1 202 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02608 Vivi-Chr1 54896581 54898241 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02608 6 447 Monolignol Biosynthesis Gene Families AT5G48930 36.807 1.93e-94 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02608 K13065 - gmx:100777007 514.612