Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02591 ATGGAAGAAAGATATGAGCCATTGAAGGAACTTGGTTCTGGAAATTTTGCTGTTGCTAGGTTGGCTAAAGATAAAAACACTGGTGAACTTGTTGCTCTCAAATACATTGAAAGGGGCAAAAAGATTGATGAGAATGTTCAAAGGGAGATAATTAACCACAGATCGTTAAGGCATCCTAATATTATCAGATTCAAAGAGGTCATGCTGACACCTTCTCATTTAGCCATTGTCTTGGAATATGCTGCTGGTGGTGAACTCTTCGAGAGGATATGCACCGCTGGCCGATTTAGTGAAGACGAGGCAAGATATTTCTTCCAACAGCTAATATCTGGTGTTAGCTACTGTCATTCAATGGAAATTTGTCATAGAGATCTGAAATTGGAAAACACGCTCTTGGACGGAAATCCATCCCCTCGGCTAAAAATTTGCGACTTCGGTTACTCCAAGTCTGCACTATTGCACTCTATACCAAAGTCAACAGTCGGAACTCCTGCATACATTGCTCCAGAGGTTCTGTCACGAAAGGAGTACGACGGAAAGACTGCAGATGTTTGGTCCTGTGGCGTGACTCTATACGTCATGCTAGTTGGTGCATATCCATTCGAAGAACCAGAAGATCCTAGAAATTTCAGAAAGACTATTGGGAGAATAATAGGCGTGCAATACTCCATACCCGACTACGTACGCATTTCTGCAGAGTGTAGGAATCTTCTATCTCGCATCTTTGTTGCCGATCCTGCCAAGAGGATCAGTCTCCAAGAGATAAAGCAGAACCCTTGGTTTTTAAAGAACTTGCCGAAAGAGATCATTGAGGCTGAAAGAAAAGGTTTTGTGGAAACAAAGAAGGATCAACCAAGCCAAAGTGTGGAAGAAATCATGAGGATCATACAAGAGGCAAGTGTACCGGGACAGGGATCGAAAGTTGGCGAAGGTGGCCAAGCTGGTTCGGGTTCAATGAACATTGAAGATGACGAGGAAATCGATGTCGATGTCAGTGGTGAGTATGAGTATGAAAATGCGTGA 1023 0.4311 MEERYEPLKELGSGNFAVARLAKDKNTGELVALKYIERGKKIDENVQREIINHRSLRHPNIIRFKEVMLTPSHLAIVLEYAAGGELFERICTAGRFSEDEARYFFQQLISGVSYCHSMEICHRDLKLENTLLDGNPSPRLKICDFGYSKSALLHSIPKSTVGTPAYIAPEVLSRKEYDGKTADVWSCGVTLYVMLVGAYPFEEPEDPRNFRKTIGRIIGVQYSIPDYVRISAECRNLLSRIFVADPAKRISLQEIKQNPWFLKNLPKEIIEAERKGFVETKKDQPSQSVEEIMRIIQEASVPGQGSKVGEGGQAGSGSMNIEDDEEIDVDVSGEYEYENA 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02591 340 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
Vivi1g02591 340 MobiDBLite consensus disorder prediction 321 340 - -
Vivi1g02591 340 SMART serkin_6 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g02591 340 FunFam Serine/threonine-protein kinase SRK2E 81 269 - -
Vivi1g02591 340 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Vivi1g02591 340 CDD STKc_SnRK2 4 260 - -
Vivi1g02591 340 Gene3D Transferase(Phosphotransferase) domain 1 81 269 - -
Vivi1g02591 340 PANTHER SERINE/THREONINE KINASE 3 287 - -
Vivi1g02591 340 Gene3D Phosphorylase Kinase; domain 1 1 80 - -
Vivi1g02591 340 MobiDBLite consensus disorder prediction 300 340 - -
Vivi1g02591 340 Pfam Protein kinase domain 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g02591 340 ProSiteProfiles Protein kinase domain profile. 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g02591 340 FunFam Serine/threonine-protein kinase SRK2E 1 80 - -
Vivi1g02591 340 SUPERFAMILY Protein kinase-like (PK-like) 3 272 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02591 Vivi-Chr1 54625296 54628198 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02591 4 274 CBL-interacting serine-threonine protein kinases AT4G24400 43.728 1.31e-71 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Vivi1g02591 Pkinase 2.5e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02591 K14498 - gmx:100782714 609.757