Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02499 ATGCCGAGAAATTCATCTCAAACACCCCCGTTTAATGGTTATGTGACAATGGCGAATGCAAATTTTCCAAGTGGTGGTGTACCTGAATTTCCCGAGTTTTCAACACAACTAACTATTGGTGGCATGATAGTTTCTAATGAAGTCGGTCCAAATTCAGAGGATTCAACTCCTAAGAGCAGGAAAACTCAGCAACCAGCATGGAACACTGAACAAAATTTGGTGCTAATTAGTGGGTGGATTAAATTTGGAACAAGCAGTGTTGTCGGGAGAAACCAGAAAGGTGAAACATATTGGGGTAAAATTGCTGAGTATTATAATGAGCATTGCTCATTCGATCCTCCGCGTGATGGACCCGCATGCCGAAACCGTTTTAATTATATGAACAAAGTGTTGGGTAAATGGATTGGCGCTTATGATGGCGCTAAACGTATGCAAGGATGTGGTTGGTCGGAGAATGATGTTTTAGCAAAAGCGCAGGAATTATATGCATGTGGGAAGAATGTTAGATTCACTTTAATGGAAGAATGGCACGCTCTCCGTGATCAACCACGTTATGGTAGTCAAGTAGGAGGAAATATTGGCTCAGGAAAGCGTAGAAACAAAATATCGGAAGATAATGCACCTCGTAGTAGAAAATATCTCAATAGAGATCATGCAGCGGCAAACCAAAGACTAATTGACGACTACTTTGCCAATGAGCCTACATATGACGATGCAATGTTTCGTCGTCGGTACCGGATGAAAAAAAATGTTTTCCTTCGAATCATTGGGGACCTTTCAAGTAGTGATAACTACTTCACCCAGCGAGTTGATGCAGCCAATAAAGAAGGTATATCACCCTTAGCAAAATGTACCACAGCAATGCGAATGTTAGCATATGGTGTGGCAGCAGATGCGGTCGATGAGTACATCAAAATAGGAGGTACTACAGCATTGGAGTGCTTACGTAGATTCTGTAAAGGAATCATACGCTTGTACGAGCAAGTGTATCTGAGAGCACCGACCCAAGATGACCTGCAAAGAATACTGCATGTTAGTGAAATGCGGGGATTCCCAGGGATGATTGGGAGTATTGACTGCATGCACTGGGAGTGGAAAAATTGTCCTAAAGCATGGGAAGGACAATTTACTAGAGGGGATAAGGGAACCACCACAGTTATTCTTGAAGCAGTTGCATCTCATGACCTATGGATCTGGCATGCCTTTTTTGGATGTCCGGGAACGTTGAACGATATAAACGTTCTAGACCGGTCACCAGTGTTTGATGACGTGGAACATGGAAAGGCTCCAAGTGTGAATTTCTTTGTGAATCAACGTCCATATAATATGGCATACTATCTAGCCGATGGTATCTACCCTTCTTATCCAACTTTCGTCAAATCGATTAGACTTCCTCAAAGTGAACCCGATAAATTATTTGCAAAATTTCAGGAGGGATGTCGGAAGGACATCGAACGTGCATTTGGAGTGCTCCAAGCTCGATTTAAAATCATCCGTGAACCAGCTCGCTTGTGGGACATAGCTGATTTGGGTATCATCATGAGGTCATACATCATATTACATAATATGATTGTTGAGGATGAACGAGATTCATATTCTCAACGTTGGACCGATTTTGAGCAATCTGGGGAAAGTGGATCTAGTGCACCACAACCATACTCGACCGAGGTGTTACCCGCTTTTGCAAATCATGTGCGTGCTAGATCAGAGTTCCGTGATCCAAATGTTCATCAAGAATTGCAAGCCGATCTAGTGAAGCACATATGGACAAAGTTTGGAATGTTCCGTGATTGA 1794 0.4264 MPRNSSQTPPFNGYVTMANANFPSGGVPEFPEFSTQLTIGGMIVSNEVGPNSEDSTPKSRKTQQPAWNTEQNLVLISGWIKFGTSSVVGRNQKGETYWGKIAEYYNEHCSFDPPRDGPACRNRFNYMNKVLGKWIGAYDGAKRMQGCGWSENDVLAKAQELYACGKNVRFTLMEEWHALRDQPRYGSQVGGNIGSGKRRNKISEDNAPRSRKYLNRDHAAANQRLIDDYFANEPTYDDAMFRRRYRMKKNVFLRIIGDLSSSDNYFTQRVDAANKEGISPLAKCTTAMRMLAYGVAADAVDEYIKIGGTTALECLRRFCKGIIRLYEQVYLRAPTQDDLQRILHVSEMRGFPGMIGSIDCMHWEWKNCPKAWEGQFTRGDKGTTTVILEAVASHDLWIWHAFFGCPGTLNDINVLDRSPVFDDVEHGKAPSVNFFVNQRPYNMAYYLADGIYPSYPTFVKSIRLPQSEPDKLFAKFQEGCRKDIERAFGVLQARFKIIREPARLWDIADLGIIMRSYIILHNMIVEDERDSYSQRWTDFEQSGESGSSAPQPYSTEVLPAFANHVRARSEFRDPNVHQELQADLVKHIWTKFGMFRD 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02499 597 ProSiteProfiles Myb-like domain profile. 59 128 IPR001005 -
Vivi1g02499 597 MobiDBLite consensus disorder prediction 198 212 - -
Vivi1g02499 597 Pfam Plant transposon protein 329 531 IPR006912 -
Vivi1g02499 597 MobiDBLite consensus disorder prediction 187 212 - -
Vivi1g02499 597 PANTHER OS12G0169200 PROTEIN 200 536 - -
Vivi1g02499 597 MobiDBLite consensus disorder prediction 45 67 - -
Vivi1g02499 597 MobiDBLite consensus disorder prediction 48 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02499 Vivi-Chr1 52490127 52492913 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02499 11 198 Glutathione S-transferase Gene Family AT5G41240 30.457 5.74e-14 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02499 - - vvo:131606208 1247.65