Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02395 ATGGAGGCTGGCGGCGGTGTTAGTGGTGGCGTTACGGTGGTGGGATCGGATGCTCCGTCGGAGTATCATGTAGCACCGAGAACCGACAACCAAACTCCGACCGGTGGATCGGCAGTTCAGTTTACTACAGCGGTTCAAGGAAATTCTCAGCCGCAGAATCCGCCGCAAACGGCGGTGGTGGCGGTGACGGTGTCTCCGGTAGATACGACGGTTCCTGAGAAAAAGAAGAGAGGCCGGCCGAGGAAGTATGCAGCGGACGGTTCGGTGAGGATGGCGCTGTCTCCGAAGCCGATATCTTCGTCTGCTCCGTTGCCGCCGGTGATCGACTTCACGGCGGAGAAGCGTGCGAAAGTGCGGCCAGTTAGTTCGGTGAGCAAAGCGAAGTTCGAGTTGGAAAATATAGGTGAATGGGTTCCTAGCTCAGCTGGTTCAAATTTCACACCTCACATCATTACTGTTAATACTGGAGAGGATGTTACTATGAAGGTGATATCATTTTCTCAGCAAGGGCCTCGAGCTTTATGCGTTCTTTCAGCAAATGGTGTCATAAAAAGTGTCACACTTCGTCAGCCCGATGCTTCTGGGGGCACATTGACATATGAGGGACTGTTTGAAATTCTTTCTTTATCTGGTTCTTTCATGCCAAACGATAGCGGAGGAACACGGAGCAGATCAGGTGGTATGAGTGTTTCTTTATCAAGTCCTGATGGCCGTGTTGTTGGTGGAGGAGTAGCTGGTCTATTGGTGGCTGCAAGTCCAGTGCAGGTAGTGGTTGGTAGTTTTATGGCAGAAAACCACAATGAGCAAAAGGCAAGAAATCAGAAACATGATGTGATATCAACTGTGACAACGGCTGCTGTTGTTCCCATCCCTACTCTTGATCCAATACCTATTCTATCATCAGTAACTTCCTTCCGTGGAGATAATTGGTCTGCTGTGCAAGCACCAGAAGCGAAGGAAAAACCTGTTTCTGACATTAATGTAGCACTTCCTGGCGGTTGA 1002 0.499 MEAGGGVSGGVTVVGSDAPSEYHVAPRTDNQTPTGGSAVQFTTAVQGNSQPQNPPQTAVVAVTVSPVDTTVPEKKKRGRPRKYAADGSVRMALSPKPISSSAPLPPVIDFTAEKRAKVRPVSSVSKAKFELENIGEWVPSSAGSNFTPHIITVNTGEDVTMKVISFSQQGPRALCVLSANGVIKSVTLRQPDASGGTLTYEGLFEILSLSGSFMPNDSGGTRSRSGGMSVSLSSPDGRVVGGGVAGLLVAASPVQVVVGSFMAENHNEQKARNQKHDVISTVTTAAVVPIPTLDPIPILSSVTSFRGDNWSAVQAPEAKEKPVSDINVALPGG 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02395 333 FunFam AT-hook motif nuclear-localized protein 1-like 148 278 - -
Vivi1g02395 333 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 42 281 IPR039605 GO:0003680
Vivi1g02395 333 MobiDBLite consensus disorder prediction 1 38 - -
Vivi1g02395 333 Pfam Plants and Prokaryotes Conserved (PCC) domain 148 261 IPR005175 -
Vivi1g02395 333 Gene3D - 148 281 - -
Vivi1g02395 333 ProSiteProfiles PPC domain profile profile. 143 284 IPR005175 -
Vivi1g02395 333 CDD DUF296 147 238 IPR005175 -
Vivi1g02395 333 SUPERFAMILY AF0104/ALDC/Ptd012-like 144 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02395 Vivi-Chr1 50379142 50381547 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02395 6 328 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 58.721 1.49e-115 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02395 - - gmx:100801730 448.358