Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02380 ATGGATAATGGTGAAGATGCTGATGATGTCGGGAGGAACAATGGTAGTTATGTGGATAATGAAGAAGGAAAAGAGGATTTGGATGATTACAAAGATATAGGTGAAATCTCAGATGATGATATAAGAGATATGAAATTTGAATCAGAGAAAAAAGCTTGTGAGTTTTATGAAACATATGCAGAATATCATGGGTTTGCGGTAAGAAGAGATGAGATTGACCGTGATTTCAAAAAAAATATTATTATGCGCCAATTAGTTTGTAATAGAGAGGGGAAAAGACATAAGAAACATATGTTAAGGGTGGATCGACATAGGGGGCCAAGGCCAATCACTCGAACAGGTTGTCTTGCTCGGTTACGTGTGGCATATGATGTAGTGACTAGAAGTTGGAGAGTTGTTGCATTTGAATCCGCTCATAATCATAAGTTAACTCCACAGCGGTTTGTTCATTTTATTCCTAAGTATCGTCGACTGAGTGAAGCTGATAAAGCGCTTGTTGATGGCTTGCATACATGTGGTGTTAGAACATGTCATATTTTGGGTTTTATGTTGGGTCAGAAAGGTGGTCATGAAGATTTGGGATTTATCAAGAAGGACCTATATAATTATTTTAGTAATGGAGCCAAGGCTAAAAGAGAAAATGGAGATGCTTTTGCTGCTTTGTCTTATTTACAAGCTAAAGCCGACAATGATCCGATGTTTTTTTCGAAGTTTACCACAACAGAGGATGGCCGTCTACAAAATTTATTTTGGTCAGATGGAACTAGCCGATTTGACTTTGAATGTTTTGGTGATGTGGTTGCATTTGACACGACCTACAAAAAGAACAGGTACAACAAACCCTTTGTTATTTTTTGTGGGTACAATCATCATGGTGAAACTACAATATTTGGGTGTGCTTTAATTTCAGACGAAAAGACAGAGACATATAAGTGGGTTTTAAATGCCTTTTCTGAAGCAATGTTCCATAAATGTCCAAATGTATTTGTTACTGACGGAGATGGTGCGATGCGGGAAGCTATTAGAGTTGAATTTCCAAATGCGTCACATCGCCTCTGTTTATGGCATTTACATCAAAATGCTATTGAGAATGTCAAGAATTCAAAGTTCCTAGAAGAGTTTAAGTCATTGATATATGCTAACTATACCCCCGAGACATTTGAAGATGTGTGGAAGAGGATTATTGATGATAATGGTCTATCAGAGAACAAATGGGTTAAGAAAACTTATGAAATAAAGAAAATGTGGTCGAGTGCGTACATGCGAGACACACTTTTTTGTGGTATAAGAACTACATCAATGTGTGAAGGTATCAATTCATTTATCCAGGGGTATGTGGACAATAAAAACAGTCTTGTGGATTTCATGCATAATTTTGAAAGAGCTTTGAAAGAATACAGACATAACGAATTATTGTCTGATTTTAAGTCGTTCTATTATGAACCCGTGTTGACAAGTGCTTTAGAAGGAATTGAGACTGGAGCATCAGAGATATTTACATGTAAAAAATTTAGGGATGTTAAAAATGAGATAGAAGGTGCAGCTGCATTGAATATCATTGACAGAATTGAGATTGGTAATAACGTGACATTGAAGATGAATAGATTTTGCAATCCAAATTCTGAATTTTCAGTTTCTCTTGAGAAGACGGAGACTGTATTTTTATGTGATTGTCGACTGTTTGAACGTTTAGGAATTCCGTGCTCTCACATTATTTGTGCCATGAGGCATGAGCATATGAATATGTTTCCAAAAAGTTTGATTTGTAAGAGATGGACTAAATCAGCCAAGGATGATCACATTGCGTCGGTGTTTTCTGAAGAAAGTGATTCTGAAAAGTTGTTCATGTTTCGTAGAGGCGCAATGTCTGCTGCATTCAACACTTTGTGTGATGTTTCTTGTAAAGATTCGGGTTCATATAAAGAGGCTCTAGAAGGAGTTTACAAATTATGTGAAAATATAAAGAAGCGTCATGAAGTAAATGATAAACGAAAGTCTAATCCATCGGTTATTGGTGATCCTGTAGAGGCTAAAACAAAAGGTGCCCCTCATAAGAAAAAAAAATTGTGGAAGACAAAAGGTGCTATTCGTAAAGAAAAAAAGTCATGGAAGTCAAGACAGTGTTCTCATTGTAAACTACCAGATCACACAAAACGGAAGTGCCCGGTACTAGCTGCACGTGATGATTTACATCAGGTTGACGATAAGGTTTCATCCGACCAATCTATTGATGAATCAATGAATTTTAATGTGTCCATAGGTCATAGTATCAATGACGACATAGACTCCCTAAAAGTCTCAAATAAAAACAAGGGTGTAGATAACGCTCGTGGTAGTAAACAAAAGGGAAAAGGTGTCAATGTTGCTTTTTCAACACAAGACTCTATCAATAAAATAACTTCTAAACAAGTTGAAAAAGAGAAATCTAGTGGACCAAAGGTAAACATGGCGGATACAAATGGACAAACTCGTCCAACTAATGTTATGGGACATGACTCTCCTATCAAAATGGAAAGTTTTAATGCAACGTGGCACAATGGTGTGGGATATGGTACTCATTATAATGGGGTTTCGAATCAAAGTGTATCAATCTTTCCCCAATTTGTTCCAAATCAAGGTGCATTGGTTCGCCCTCAATTTATTCCAAATCAAAGTTCATTGATTTTCCCCCAATTCGTTCCAAATCAAAGGGCATCAATTTTCCCTCAATTTCCATTAGTAGACAACTTCACATCACATTCAAATTCTCTTTTATATAACAGATCACATAATATTCCACATAGTACGCATTTTATGGGCACATTGAAGGAGATGGAACATTCTGCAAAGTTCACTAGAAACAAAGGTGAAAATGAAGATTCCAAACCCACAAATCGCAATCGGTGA 2886 0.3659 MDNGEDADDVGRNNGSYVDNEEGKEDLDDYKDIGEISDDDIRDMKFESEKKACEFYETYAEYHGFAVRRDEIDRDFKKNIIMRQLVCNREGKRHKKHMLRVDRHRGPRPITRTGCLARLRVAYDVVTRSWRVVAFESAHNHKLTPQRFVHFIPKYRRLSEADKALVDGLHTCGVRTCHILGFMLGQKGGHEDLGFIKKDLYNYFSNGAKAKRENGDAFAALSYLQAKADNDPMFFSKFTTTEDGRLQNLFWSDGTSRFDFECFGDVVAFDTTYKKNRYNKPFVIFCGYNHHGETTIFGCALISDEKTETYKWVLNAFSEAMFHKCPNVFVTDGDGAMREAIRVEFPNASHRLCLWHLHQNAIENVKNSKFLEEFKSLIYANYTPETFEDVWKRIIDDNGLSENKWVKKTYEIKKMWSSAYMRDTLFCGIRTTSMCEGINSFIQGYVDNKNSLVDFMHNFERALKEYRHNELLSDFKSFYYEPVLTSALEGIETGASEIFTCKKFRDVKNEIEGAAALNIIDRIEIGNNVTLKMNRFCNPNSEFSVSLEKTETVFLCDCRLFERLGIPCSHIICAMRHEHMNMFPKSLICKRWTKSAKDDHIASVFSEESDSEKLFMFRRGAMSAAFNTLCDVSCKDSGSYKEALEGVYKLCENIKKRHEVNDKRKSNPSVIGDPVEAKTKGAPHKKKKLWKTKGAIRKEKKSWKSRQCSHCKLPDHTKRKCPVLAARDDLHQVDDKVSSDQSIDESMNFNVSIGHSINDDIDSLKVSNKNKGVDNARGSKQKGKGVNVAFSTQDSINKITSKQVEKEKSSGPKVNMADTNGQTRPTNVMGHDSPIKMESFNATWHNGVGYGTHYNGVSNQSVSIFPQFVPNQGALVRPQFIPNQSSLIFPQFVPNQRASIFPQFPLVDNFTSHSNSLLYNRSHNIPHSTHFMGTLKEMEHSAKFTRNKGENEDSKPTNRNR 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02380 961 MobiDBLite consensus disorder prediction 813 829 - -
Vivi1g02380 961 PANTHER OS01G0519700 PROTEIN 41 598 - -
Vivi1g02380 961 SMART 26again6 554 581 IPR006564 GO:0008270
Vivi1g02380 961 Pfam MULE transposase domain 266 360 IPR018289 -
Vivi1g02380 961 MobiDBLite consensus disorder prediction 802 829 - -
Vivi1g02380 961 MobiDBLite consensus disorder prediction 661 688 - -
Vivi1g02380 961 MobiDBLite consensus disorder prediction 1 29 - -
Vivi1g02380 961 Pfam FAR1 DNA-binding domain 54 144 IPR004330 -
Vivi1g02380 961 ProSiteProfiles Zinc finger SWIM-type profile. 543 579 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02380 Vivi-Chr1 50028921 50037562 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi1g02380 MULE 1.3e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02380 - - vvo:131629359 1820.05