Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02349 ATGAATTATATCCTTTTCATTGCTCTCACTTTTGTGCTGAGTTTCCATGTTCATTTTACTCAAGGAACTGAACTTCCCCTTAACACTGAGAGTAGAGAGAAAAGCAGTTCAAAAATATACATTGTTCATGTGAATCAACCAGAGGGTAAGATATTTACTCAATCTGAAGAAGATTTACAAAGTTGGCACCATTCATTCATGCCACCAACTGTTATGAGCTCTAATAAACAACCGCGAATGATATATTCATACCGAAATGTGCTGAGTGGTTTTGCTGCAAGACTCACTCAAGAAGAGTTGAGAGCTGTGCAACAGAAAAACGGCTTTATTTCAGCTCATCCCGAAAGGACACTACGTCGTCAAACCACGCATACTCCAGATTTCTTGGGGCTGCAGCAAAATATCGGATTATGGAAGGATTCAAACTTCGGAAAGGGAGTTATTATTGGTGTCCTAGATTCAGGAATCACACCTGGTCATCCTTCATTTAGTGATGCTGGAATATCACCGCCACCGCTGAAATGGAAAGGGAGATGTGACCTTAATGGCACAGCTTGTAACAACAAACTAATTGGAGCAAGGTCTTTCAACAATGCAGCTATGGCAATGAAAGGAGAGAAAGCTGAAGCACCAATTGATGAGGATGGACATGGTACTCATACAGCAAGTACAGCGGCGGGTGCTTTTGTGGACGACGCAGAAGTACTAGGAAATGCCAAAGGTACAGCAGCAGGGATGGCTCCTCATGCTCACCTAGCAATTTACAAAGTATGCTTTGGTGACGACTGTCCTGAGAGTGATATACTAGCAGCATTAGACGCAGCTGTGGAGGATGGTGTGGATGTAATATCCATATCGCTTGTTCTAGATGAACCTCCTCCATTTTTCAATGATACAATTGCCATAGGCGGTTTTGCAGCAATTCAGAAGGGAATCTTTGTAAGTTGTTCAGCAGGAAACTTTGGCCCTTCTGATGCCTCCTTAGTTAATGGAGCTCCATGGATCCTCACAGTTGGAGCAAGCACTATTGACAGAAGCATTGTAGCAACAATAGTGCTTGGAAACGGAGAAGAATTTGAGGGTGAATCTGTTTTCCAGCCTTCCGATTTCTCTCCAACATTGCTGCCCTTAGCATTTGCAGGAACAAATGCACTTTGTGGTAACGGATCCTTGAACGACATTGATTTCAGAGGAAAGGTTGTTTTGTGTGAAAGGGGAGGGGGTATCGGAAGAATTGCGAAAGGACAAGAAGTAAAAAGAGTAGGAGGCGCCGCCATGATTCTCATGAATGACGAAATCAATGGTTTTAGTCTCTCAGCTGATCCACATGTCCTACCAGCAACACTTGTCAGCTATGTTTCTGGACTTAAAATCAAAGCATATATAAATTCAACTTCAAAACCTACAGCAACCATTTCGTTTAAGGGAACAGTTATCGGAAACTCCTTATCGCCAGCAGTTGCATCCTTCTCCTCGAGAGGTCCCAACTTGCCAAGTCCTGGTATATTGAAACCAGACATTATCGGACCTGGCGTGAGCATCCTAGCTGCTTGGCCCTTTCCCTCGAATAACAGCACCGATTCAAAACTCAATTTCAACATTATGTCTGGAACATCAATGTCATGTCCACATCTTAGTGGCATTGCTGCTTTGCTCAAAAGCTCTCATCCTGATTGGTCTCCAGCTGCCATAAAATCTGCCATAATGACTTCTGCAGACACGTTGAACTTAGAAAACAAACCTATTGTTGACGAAACACTTCAGCCAGCAAATTTCTTTGCCACAGGTTCGGGACACGTGAATCCATCAAGAGCAGATGATCCAGGATTAGTATATGATATCCAACCTGATGATTATATACCTTATCTATGTGGTTTAGGATACAGTGATAGGCAAGTCGGAATCATTGCGCACAGAACAATTAACTGTGCTGAAACATCAAGCATTCCTGAAGGAGAACTTAACTACCCCTCATTTTCTGTTGTGCTTGGCTCCTCACAGACACTCACAAGGACAGTGACAAATGTCGGTGAAGCATACTCATCTTATGTAGCCGTAGTAACAGCGCCAAAAGGGGTTGATGTAAAAGTCCAGCCACAAGAGCTTCACTTTTCAGAAGCCAACCAGAAAGAGACATATTCAGTGACATTCAACCGTTTAGAAAATGGTAATAAGACAGAAGAATTTGCTCAAGGATCTCTGAAATGGGTCTCTGCTAAACACACTGTCACGAGTCCTATCTTGGCCAAATTTGCATAG 2259 0.429 MNYILFIALTFVLSFHVHFTQGTELPLNTESREKSSSKIYIVHVNQPEGKIFTQSEEDLQSWHHSFMPPTVMSSNKQPRMIYSYRNVLSGFAARLTQEELRAVQQKNGFISAHPERTLRRQTTHTPDFLGLQQNIGLWKDSNFGKGVIIGVLDSGITPGHPSFSDAGISPPPLKWKGRCDLNGTACNNKLIGARSFNNAAMAMKGEKAEAPIDEDGHGTHTASTAAGAFVDDAEVLGNAKGTAAGMAPHAHLAIYKVCFGDDCPESDILAALDAAVEDGVDVISISLVLDEPPPFFNDTIAIGGFAAIQKGIFVSCSAGNFGPSDASLVNGAPWILTVGASTIDRSIVATIVLGNGEEFEGESVFQPSDFSPTLLPLAFAGTNALCGNGSLNDIDFRGKVVLCERGGGIGRIAKGQEVKRVGGAAMILMNDEINGFSLSADPHVLPATLVSYVSGLKIKAYINSTSKPTATISFKGTVIGNSLSPAVASFSSRGPNLPSPGILKPDIIGPGVSILAAWPFPSNNSTDSKLNFNIMSGTSMSCPHLSGIAALLKSSHPDWSPAAIKSAIMTSADTLNLENKPIVDETLQPANFFATGSGHVNPSRADDPGLVYDIQPDDYIPYLCGLGYSDRQVGIIAHRTINCAETSSIPEGELNYPSFSVVLGSSQTLTRTVTNVGEAYSSYVAVVTAPKGVDVKVQPQELHFSEANQKETYSVTFNRLENGNKTEEFAQGSLKWVSAKHTVTSPILAKFA 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02349 752 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 149 160 IPR023827 -
Vivi1g02349 752 Pfam Subtilase family 144 580 IPR000209 GO:0006508|GO:0008236
Vivi1g02349 752 CDD Peptidases_S8_3 121 573 IPR034197 -
Vivi1g02349 752 Pfam PA domain 383 457 IPR003137 -
Vivi1g02349 752 SUPERFAMILY PA domain 383 467 IPR046450 -
Vivi1g02349 752 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 40 747 IPR045051 -
Vivi1g02349 752 FunFam subtilisin-like protease SBT1.5 344 479 - -
Vivi1g02349 752 Pfam Fibronectin type-III domain 653 748 IPR041469 -
Vivi1g02349 752 Gene3D - 344 479 - -
Vivi1g02349 752 FunFam Subtilisin-like protease SBT1.5 146 383 - -
Vivi1g02349 752 ProSiteProfiles Serine proteases, subtilase domain profile. 128 606 - -
Vivi1g02349 752 Pfam Peptidase inhibitor I9 40 119 IPR010259 -
Vivi1g02349 752 CDD PA_subtilisin_like 350 472 - -
Vivi1g02349 752 Gene3D Peptidase S8/S53 domain 146 619 IPR036852 GO:0004252|GO:0006508
Vivi1g02349 752 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 26 120 IPR037045 -
Vivi1g02349 752 PRINTS Subtilisin serine protease family (S8) signature 213 226 IPR015500 -
Vivi1g02349 752 PRINTS Subtilisin serine protease family (S8) signature 536 552 IPR015500 -
Vivi1g02349 752 PRINTS Subtilisin serine protease family (S8) signature 144 163 IPR015500 -
Vivi1g02349 752 Gene3D - 623 751 - -
Vivi1g02349 752 SUPERFAMILY Subtilisin-like 121 610 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02349 Vivi-Chr1 49688034 49690292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02349 25 747 Subtilisin-like Serine Gene Family AT1G04110 44.603 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02349 - - gmx:100812208 1195.65