Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02331 ATGGCTTCAAATATTTGCAAACCTTCTCGTCGCGATCATTCTCTAATAAAAACAACCAAATGTGCTTCAAAACCTACCCTTTTACTGAAAGACTATCTCAGGGACGACCTGAGTTCATGTTCATCTAGCGGTTTCAAATCATTTCCGCGCAGGCAATGCTGCACCACCGTTGGATTTGTCAAGGAAAAAGATCTCAAACTCCAACGCAAGAAGAGAAGCACTGCAAGTACACTTCCTCGGCGAAGGCCAACAGTAACCGCTCTGCAGAGAGCTTCCGGAGCAGTAATAACAGCCATTAGGTCATTGTCCTCACAAAAGAGCTGTAAGCCAAAGAAAGCTTCTACCGGTGTTCTTTCTAGAAGCTTCTCGAGGAAGCTGTTAAGCCGAAGATTCTGGAGAAAACCTGTGAAGGAAGATGCAAGCGAAGGTGTACTGAGGTGTAGGAGATCTTTCCGTGATCTCCTTATTCATGAACGTGATTATAAACCGACGTCGTTCAGTGAGGATACTGTTTTCACTCCCAAAAGCGTCGCCACTGTCTCTTCAGGTTGTTGCAGTAACAGCTGGGGAGAAAGTGAGTTCACATTTTCATCAAACACTACTTCCTCCGACAGTTCCATAGATAACCTAGTTGACGGCGTCACAAACGGCACTCCCCATCGTCACAAGATAGAAGCAGTAACACATGGGGAATGGTCAACCGAGAAGGAACAATTCAGCCCTGTATCAATACTGGATTGCCCATTTGAAGATGAAGAAGAAATCAAATCTAGTTTCATGATCAATTCTTTCTTCCAAGGAGCAGAAAACAAGCATATACAGAAGACACGACATTTTGAGAACATATCTTCAATTGAGCCATTGGTTTTAGACCTAGAAGACGAACCACGTAACTATTCTTCAAAACAATGTTCATTATCAGTAATAGAGTCAAATATTGGAGACAACAAAAACAAGGATGAGCTAAACAAATTGATGATTAACACAGAGAAACTACTGTTTGATTACTTAGAACAGCGCATTGAAGAAAATGATAATGCTGATTATTCAAAGAATCTTAACCTTTTCAATGTAGTTGATGATTGGATGAGAGGGAAACCACAAGAACCATATTTGGGTTGGGAAGTGAAAGAAGGAAGATATGTCTACATTAGTGAGATGGAGAGACGTGGAGAGTGGAAAAACTATGATCAAGAAACGGAACAACTTGTTCTTGAGTTGGAAAATGATGTCTTAAGTAGTTTGGTTAACGAGATTGTTCTTGACCTTGTGATATGCTAG 1281 0.4106 MASNICKPSRRDHSLIKTTKCASKPTLLLKDYLRDDLSSCSSSGFKSFPRRQCCTTVGFVKEKDLKLQRKKRSTASTLPRRRPTVTALQRASGAVITAIRSLSSQKSCKPKKASTGVLSRSFSRKLLSRRFWRKPVKEDASEGVLRCRRSFRDLLIHERDYKPTSFSEDTVFTPKSVATVSSGCCSNSWGESEFTFSSNTTSSDSSIDNLVDGVTNGTPHRHKIEAVTHGEWSTEKEQFSPVSILDCPFEDEEEIKSSFMINSFFQGAENKHIQKTRHFENISSIEPLVLDLEDEPRNYSSKQCSLSVIESNIGDNKNKDELNKLMINTEKLLFDYLEQRIEENDNADYSKNLNLFNVVDDWMRGKPQEPYLGWEVKEGRYVYISEMERRGEWKNYDQETEQLVLELENDVLSSLVNEIVLDLVIC 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02331 426 PANTHER OS04G0572500 PROTEIN 23 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02331 Vivi-Chr1 49140535 49143378 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02331 9 423 TRM (TON1 Recruiting Motif) Superfamily AT4G23020 29.202 2.40e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02331 - - tpra:123887284 520.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g02331 1 49140535 49143378 Vivi1g02331 1 49140535 49143378 ECH