Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02318 ATGTTGGCTGGTTGTTCTAGCTCGACATTGTTGTCACCTACTCACAGATTAAGGAGTGAAGTATCATCAGCAGCACAGTTTCAAGCTTGTCATTTCCAGATACCATCAATGAGCGCACAGAGATTGGATTTACCATGTAGCTTCCCGAGGAAAGACGGTTCTTCGCGTTCGCAGCAGCAGTTGAGGCCCGTGGGAATTTCGGTGGAGAAGCCTGAAGTCAAGAGCAGCAGCAATGGTAGTAATGCGTGTTCTCTGCAGCAGAACATTCGGCTACCGCCTTTAGCAACGACAGCGCAGACATTGGGAGAGATCAAGGATGAGGAGTTTTGGGAGAAGGGTGGGAGGAGTTTGAAGAGGTTGGCGGAACATGGATCTTTGGATGAGTCTTTTGCAAATAGAGTTAAGAGGAAAAAGGGTAACGGTGGTGATGAGAATTTTGAGGAGTTTGAAAGGGAGAGTTTCAGTTTGGCACAATTTGGAGCTGGAAACTTTTGGTCTGTTCATAATTTTGGAGGCTTTAATAATAATCCTTCACTTCCTTTCTCTCTGAATTGTTCTGGAGATGAGGAAAGGGTTTGTTTTGCTCCTGCTGAAGTGGTTTCTGCACCTTTGCCTTTGTCGAACAGTCCTTGGATCGAATCTGCTGTAACAAAGATCACCAATTTCGGTGAGGGTAGCCACCAACATCAACATCATCATGTCAACGAAGGTTCAGTCTCTAATGATTCATCAGAAAGCCAGAGTTTGAGCCTGAGGTTGAATGAGAATGCATCAGAACACGGGGATGGTAGTGGTTCAGGGAATCCTTATCAGCATGAAGGCACTGAAGTGGAGACAGGAGAAGAGGATGAAGAAGAGGAGCATCGCGGTTTTGAGCTTCTGAGCTTGCTTACCGGTTGTGTTGATGCTATTGGATCAAGGAATGTGGCAGCAGTCAATCATTTCATAGCGAAATTGGGGGATCTTGCATCTCCAAGGGGAACTTCCATAAGCAGAATTTGTGCTTATTTTACAGAAGCCTTAGCCATCAGAGTCACCAGGCTTTGGCCTCATGTTTTTCACATCACTGCCACTTCTCGCGATTTCGACAGGGTGGTAGATGATGATGAAACTGTCACTGCTTTAAGGCTTCTAAACCAGGTTACCCCAATTCCCAAGTTTCTTCATTTCACATCAAATGAGATGCTGTTGAGGGCTTTTGAAGGTAAAGAAAGGGTTCACATTATAGACTTTGACATAAAGCAAGGACTTCAATGGCCTAGCTTGTTCCAAAGTTTAGCTTCAAGGACTAATCCTCCTAGCCATGTTCGAATCACTGGCGTGGGGGAATCAAAGCAAGAGCTGAATGAAACTGGAGACAGGCTTGCTGGTTTTGCCGAGGCTTTGAACCTTCCTTTTGAATTTCATCCAGTGGTGGACAGACTTGAAGATGTGAGGCTTTGGATGCTTCATGTGAAGGAACATGAAACTGTGGCTGTGAACTGTGTTTTGCAGCTTCACAAGACCCTTCATGACGGAAGTGGAGGAGCATTGAGAGACTTTTTGGGTCTCATTCGCAGCACCAATCCTACAATTATGGTTATGGCAGAGCAGGAAGCGGAACACAATGAGGCGAGGTTGGACTCAAGAGTCTGCAATTCGTTGAAACATTACTCGGCGCTGTTTGATTCGATTGATCATAGCGGCCTTCCACTGGAAAGTCCAATGAGGATGAAGATAGAAGAGATGTTTGCTAGGGAGATAAGAAACATCATTGCTTGTGAAGGAAGGGACAGGTTGGAGAGGCACCAGAGTTTCGGGAATTGGAGGAAGATGATTGTGGAGCATGGAGGGTTCAGATGCATGGGAGTGACTGATAGGGAAATGTTTCAGAGCCAGTTTCTGTTGAAGATGTATTCTTGTGATAATTACAATATTCAGAAGCAGGAGAAGGAAGGAGCAACAGCACTTACTTTGGGTTGGCTTGATCAGCCTCTCTATACCGTATCTTCTTGGGCACCGGTCGATGTCGCTGGAAGCTCATCCTCTTTTTCTCAGCCAGCCTGA 2046 0.457 MLAGCSSSTLLSPTHRLRSEVSSAAQFQACHFQIPSMSAQRLDLPCSFPRKDGSSRSQQQLRPVGISVEKPEVKSSSNGSNACSLQQNIRLPPLATTAQTLGEIKDEEFWEKGGRSLKRLAEHGSLDESFANRVKRKKGNGGDENFEEFERESFSLAQFGAGNFWSVHNFGGFNNNPSLPFSLNCSGDEERVCFAPAEVVSAPLPLSNSPWIESAVTKITNFGEGSHQHQHHHVNEGSVSNDSSESQSLSLRLNENASEHGDGSGSGNPYQHEGTEVETGEEDEEEEHRGFELLSLLTGCVDAIGSRNVAAVNHFIAKLGDLASPRGTSISRICAYFTEALAIRVTRLWPHVFHITATSRDFDRVVDDDETVTALRLLNQVTPIPKFLHFTSNEMLLRAFEGKERVHIIDFDIKQGLQWPSLFQSLASRTNPPSHVRITGVGESKQELNETGDRLAGFAEALNLPFEFHPVVDRLEDVRLWMLHVKEHETVAVNCVLQLHKTLHDGSGGALRDFLGLIRSTNPTIMVMAEQEAEHNEARLDSRVCNSLKHYSALFDSIDHSGLPLESPMRMKIEEMFAREIRNIIACEGRDRLERHQSFGNWRKMIVEHGGFRCMGVTDREMFQSQFLLKMYSCDNYNIQKQEKEGATALTLGWLDQPLYTVSSWAPVDVAGSSSSFSQPA 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02318 681 MobiDBLite consensus disorder prediction 239 273 - -
Vivi1g02318 681 MobiDBLite consensus disorder prediction 225 288 - -
Vivi1g02318 681 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 245 662 IPR005202 -
Vivi1g02318 681 ProSiteProfiles GRAS family profile. 284 666 IPR005202 -
Vivi1g02318 681 MobiDBLite consensus disorder prediction 45 81 - -
Vivi1g02318 681 Pfam GRAS domain family 294 665 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02318 Vivi-Chr1 48966152 48969491 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02318 1 666 GRAS Transcription Factor Family AT1G63100 54.950 0.0 677
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vivi1g02318 GRAS 3.3e-125 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02318 - - tcc:18606459 912.138