Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02315 ATGGGAAAAGCATCACGCTGGTTTCGCGGTTTTCTCGGTCTAAAAAAACCGGAAAACGGTTCAACCGATCAGAAACCGCCCAAAGAGAAACGGAGATGGAGTTTCGTCAAATCATACAGAGAAGAACAACAACAACAACCACTGCAGCATCACAACAGCCACGTCACGTTCTCAACAGAACACGTAAACAACGACAACAAACAGGCCATCGCAGTCGCTGCTGCCACCGCTGCCGCCGCGGAGGCCGCCGTGGCCGCTGCTAAAGCCGCTGCCGACGTCGTTCGTTTCAACAGCAGTAACGGCGTCGTCAGGATACGCGAACAATGGGCGGCCGTTAAGATCCAAGCCGCTTTTCGAGGCAGTTTGGCGAGGAAGGCGCTGCGAGCATTAAAAGGGCTGGTGAAGCTCCAGGCTCTTGTGAGAGGTCACATTGAGAGGAAAAGAACAGCAGAGTGGCTCAAACGGATGCAATCACTTGTACGGGCACAGGCCCGATTTAATGCAGCACGTGCCCTACAAACCTCCCATTCTAATGTAAAATCATCTACACTCTATCTCCATGGGGGTCCAGCAACACCAGAGAAATCAGAAAGCCCTGTTAGATCTAGGAGCATGAAATCCGAACATTCACCAATATTCAAGAGAAACGGTTCCAAATCATGTCTCTCATTCAGCGGCAATATATCAGAGAATCAGATAGATGAACAATCATGGAATAGAGTAAAATCACTAATAAGATCCTATAGCAGGAGCGACGAGAAAACCGAAAGGATTGTGGAAATTGATTCGGGAAAACAACACATAATTGCCTCAAAACGTAGAAACCTCTTTCACTCCATAAGTGATACCGATCATTATTATTACAGTCAGAATTTAACCCCTACAAAGGATTCAAAATCTCAACATTCTAGTCATAGCCAATCATGTGAGGTTCAATCTTATTACAACCCGCTTAAACTCAGCGAAGTCGAAGAGAACAGTCCTCAATTTTTATCATCTGCAACTTCAAAAGAGGATGGATACAAAAGAAGCCCATTTACTCCTACAAAGAGTGATGGTTCAAGAAGCAACCTTAAAGGCTATTCTGATTACCCAAGTTACATGGCATATACAGAGTCATCAAAGGCGAAAGTTAGATCCATGAGTGCACCAAAACAAAGGCCTCAACATGAGAAATATGGTTCCTCTAATAGGTACTCACTCAATGGACATGACATTGCAAGATTGACCGCACAGAGAAACTCTGCACTGCAAGCAAGTTTTGCAAGTAAAGGGTATCCAGGTTCTGGTCGTTTGGATAAGCTTGGAATGCCTGTGGGGTATAGATAA 1329 0.4522 MGKASRWFRGFLGLKKPENGSTDQKPPKEKRRWSFVKSYREEQQQQPLQHHNSHVTFSTEHVNNDNKQAIAVAAATAAAAEAAVAAAKAAADVVRFNSSNGVVRIREQWAAVKIQAAFRGSLARKALRALKGLVKLQALVRGHIERKRTAEWLKRMQSLVRAQARFNAARALQTSHSNVKSSTLYLHGGPATPEKSESPVRSRSMKSEHSPIFKRNGSKSCLSFSGNISENQIDEQSWNRVKSLIRSYSRSDEKTERIVEIDSGKQHIIASKRRNLFHSISDTDHYYYSQNLTPTKDSKSQHSSHSQSCEVQSYYNPLKLSEVEENSPQFLSSATSKEDGYKRSPFTPTKSDGSRSNLKGYSDYPSYMAYTESSKAKVRSMSAPKQRPQHEKYGSSNRYSLNGHDIARLTAQRNSALQASFASKGYPGSGRLDKLGMPVGYR 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02315 442 MobiDBLite consensus disorder prediction 325 362 - -
Vivi1g02315 442 MobiDBLite consensus disorder prediction 1 32 - -
Vivi1g02315 442 Pfam Protein of unknown function (DUF4005) 327 406 IPR025064 -
Vivi1g02315 442 ProSiteProfiles IQ motif profile. 131 158 IPR000048 GO:0005515
Vivi1g02315 442 Pfam IQ calmodulin-binding motif 109 128 IPR000048 GO:0005515
Vivi1g02315 442 Pfam IQ calmodulin-binding motif 134 148 IPR000048 GO:0005515
Vivi1g02315 442 Gene3D - 105 158 - -
Vivi1g02315 442 ProSiteProfiles IQ motif profile. 107 135 IPR000048 GO:0005515
Vivi1g02315 442 MobiDBLite consensus disorder prediction 199 213 - -
Vivi1g02315 442 SMART iq_5 129 150 IPR000048 GO:0005515
Vivi1g02315 442 SMART iq_5 106 128 IPR000048 GO:0005515
Vivi1g02315 442 MobiDBLite consensus disorder prediction 375 399 - -
Vivi1g02315 442 PANTHER IQ-DOMAIN 5-RELATED 1 402 - -
Vivi1g02315 442 MobiDBLite consensus disorder prediction 180 214 - -
Vivi1g02315 442 MobiDBLite consensus disorder prediction 291 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02315 Vivi-Chr1 48928103 48931258 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02315 1 442 IQD Protein Family AT4G23060 42.994 4.34e-75 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02315 - - gmx:100793587 457.603