Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02298 ATGAGAAATATAATGTCTTCATCCATATGTCATCATTCCTTATTGTTACTTCTCATTTTCTTTTTTCTCCAGGACCCCACCCAAGCTATCAAAAAATCCTATGTTGTATACTTAGGACAACAATCTTATGGTTCAAGACTTTCAGCTCTTGATGTTGAATCTGTCACAAACTCTCATTATGCCATGCTTGGTTCATACATTGGAAGCACCGAGAAGGCGAAAGAAGCAATATTTTACTCTTATAATAAATATTTTAATGGCTTCGCCGCAGTGCTTGATGAAGATGAAGTTGCAAAAATTTCAAAGAATCCAAACGTGTTATCAATTTTCTTAAACAAACCAAGAGAACTTCACACAACTCATTCATGGAATTTTCTTGGATTAGAAAGAAGTGATGGTATTTCAAAACGCTCAATATGGAGCCAATCCGAAGGAGAAGATATAATTATTGGAAATTTAGACACAGGTGTTTGGCCTGAATCAAAGAGCTTTAGTGATGATGGATTTGGTCCGGTTCCAACCAGATGGCGTGGAATTTGTCAAGTTGACACAAATAATACCGATAATTTTCACTGCAACAGAAAGCTTATTGGAGCAAGATATTTTTACAAAGGCTATTTAGCAGATCTTGGGGATGCTAAAAATGTAACCTTCAATAGTGCACGCGACCTCGATGGTCATGGCACACATACTTTATCAACAGCTGGAGGCAATTTCGTAGAAAATGCAAGTATATTTGGCTATGGAAATGGAACAGCAAGTGGTGGATCACCAAAAGCGCGAGTTGCAGCCTATAAGGTGTGCTGGCCGCCACTTGCTGCTGGTGGCGGATGTTACGAAGCAGACATTTTGGCTGCTTTTGAAGCCGCTATTAGTGACGGTGTTGATGTGATTTCCGCATCTCTGGGTGGTACTCCAGTTGAATTTTTCGAAAGCAGTGTTTCTATAGGATCTTTCCATGCTGCTGCTCAGGGCATTGTTGTAGTAAGCTCGGCAGGAAACACAGGGCCTTCTCCCAGCACAGTATCTAACGTAGAACCATGGTCCATCACAGTTGGTGCAAGCACAATGGATCGATCTTTTACTAGTTTTGTTACACTTGATAACAAGAAAATACTCAAGGGAGCTAGCCTTTCAGAATCCAACTTGCCACCTAACAAGCTTTACCCTTTATTAAGCGCAGCAGATGCCGGAGCTCATAACGCATCTTCAGCTGACGCTTTGCTTTGCAAGACTGGAACTCTTGATCCGACAAAGGTTGAAGGAAAAATATTGGTTTGTCTTCGCGGTGACAATGATAGAGCTGACAAGGGTGTGCAAGCTGCTCGTGCTGGCGCTGTTGGTATGGTTTTGGCTAATAACAAAGACGGAGCGAATGACATTATAGCTGATGCTCATGTGCTTCCTGCTTCACATATTACCTTTAAAGATGGAATCTACCTTTTTAATTACATCAACTCCACCAAGTCTCCTATGGCTTCAATTTCTAGAGTTGAAACACAGATGGGTGTGAAGCCAGCTCCATTTATGGCTTCCTTTTCATCAAGAGGGCCTAATCCCCTTGATCCATCAATCCTCAAGCCCGACATTACGGCTCCAGGAGTTGAAGTAATTGCTGCTTTTAGTGAAGCTGCATCTCCTTCTGATCAACCATCTGATAAACGCAGATCTTCTTACAATACTTTGTCAGGAACATCAATGTCATGTCCACATGTTTCTGGCATTGTTGGTTTAGTTAAATCTATTCATCCCGATTGGAGTCCCGCTGCTATTAAATCCGCGATTATGACCACAGCAAGAATAAAAGATAATACTGGAAGACTTATGTTGGAGTCGTCGCTGCAAAATGCAACTCCATTTGCATTTGGTGCGGGGCATGTCCAACCTAATCGCGCAGTGGATCCTGGACTTGTTTATGACCTAAATATTACCGACTACATGAACTATTTGTGCAATCGTGCCTATAAAGGTTCTCATCTTAGTGTGTTCTACCGCAAGCCATACACTTGTCCGAAATCTTTCAGTTTAGTAGATTTCAATTATCCAACAATCACAATTCCTAACTTAAAAATTGGACAGTCACTAAATGTGACGCGTACACTTACCAATGTTGGGCCCCCAAGCACATACGTGGTTCGCATTGCAGCGGCTCGCGAGGTTTTAGTCTCTGTTGAGCCTAATGTATTGAACTTTAAGGAAAAGGGTGAAAAGAGAGAGTTTAGAGTCAGTTTGAGTTTGAGGCCTCTAACTACGAATAATAATAGTACTGGTGATTATGTATTTGGGAGGTTGGATTGGACTGATGGCAAGCATCATGTTAGGAGTTCTATTGCAATTAGGCCACAAAACTGA 2352 0.4145 MRNIMSSSICHHSLLLLLIFFFLQDPTQAIKKSYVVYLGQQSYGSRLSALDVESVTNSHYAMLGSYIGSTEKAKEAIFYSYNKYFNGFAAVLDEDEVAKISKNPNVLSIFLNKPRELHTTHSWNFLGLERSDGISKRSIWSQSEGEDIIIGNLDTGVWPESKSFSDDGFGPVPTRWRGICQVDTNNTDNFHCNRKLIGARYFYKGYLADLGDAKNVTFNSARDLDGHGTHTLSTAGGNFVENASIFGYGNGTASGGSPKARVAAYKVCWPPLAAGGGCYEADILAAFEAAISDGVDVISASLGGTPVEFFESSVSIGSFHAAAQGIVVVSSAGNTGPSPSTVSNVEPWSITVGASTMDRSFTSFVTLDNKKILKGASLSESNLPPNKLYPLLSAADAGAHNASSADALLCKTGTLDPTKVEGKILVCLRGDNDRADKGVQAARAGAVGMVLANNKDGANDIIADAHVLPASHITFKDGIYLFNYINSTKSPMASISRVETQMGVKPAPFMASFSSRGPNPLDPSILKPDITAPGVEVIAAFSEAASPSDQPSDKRRSSYNTLSGTSMSCPHVSGIVGLVKSIHPDWSPAAIKSAIMTTARIKDNTGRLMLESSLQNATPFAFGAGHVQPNRAVDPGLVYDLNITDYMNYLCNRAYKGSHLSVFYRKPYTCPKSFSLVDFNYPTITIPNLKIGQSLNVTRTLTNVGPPSTYVVRIAAAREVLVSVEPNVLNFKEKGEKREFRVSLSLRPLTTNNNSTGDYVFGRLDWTDGKHHVRSSIAIRPQN 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02298 783 CDD PA_subtilisin_like 365 495 - -
Vivi1g02298 783 ProSiteProfiles Serine proteases, subtilase domain profile. 122 633 - -
Vivi1g02298 783 SUPERFAMILY PA domain 400 490 IPR046450 -
Vivi1g02298 783 Pfam Subtilase family 145 625 IPR000209 GO:0006508|GO:0008236
Vivi1g02298 783 Pfam PA domain 406 478 IPR003137 -
Vivi1g02298 783 PRINTS Subtilisin serine protease family (S8) signature 145 164 IPR015500 -
Vivi1g02298 783 PRINTS Subtilisin serine protease family (S8) signature 223 236 IPR015500 -
Vivi1g02298 783 PRINTS Subtilisin serine protease family (S8) signature 563 579 IPR015500 -
Vivi1g02298 783 Pfam Fibronectin type-III domain 678 779 IPR041469 -
Vivi1g02298 783 ProSitePatterns Serine proteases, subtilase family, serine active site. 564 574 IPR023828 -
Vivi1g02298 783 Pfam Peptidase inhibitor I9 33 118 IPR010259 -
Vivi1g02298 783 Gene3D Peptidase S8/S53 domain 147 646 IPR036852 GO:0004252|GO:0006508
Vivi1g02298 783 Gene3D - 650 781 - -
Vivi1g02298 783 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 118 IPR037045 -
Vivi1g02298 783 Gene3D - 358 502 - -
Vivi1g02298 783 MobiDBLite consensus disorder prediction 542 563 - -
Vivi1g02298 783 MobiDBLite consensus disorder prediction 545 563 - -
Vivi1g02298 783 FunFam subtilisin-like protease SBT1.5 358 502 - -
Vivi1g02298 783 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 60 778 IPR045051 -
Vivi1g02298 783 FunFam Subtilisin-like protease SBT5.3 23 118 - -
Vivi1g02298 783 FunFam Subtilisin-like protease SBT1.5 147 371 - -
Vivi1g02298 783 SUPERFAMILY Subtilisin-like 117 637 IPR036852 GO:0004252|GO:0006508
Vivi1g02298 783 CDD Peptidases_S8_3 116 599 IPR034197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02298 Vivi-Chr1 48590518 48599219 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02298 18 780 Subtilisin-like Serine Gene Family AT5G59810 57.516 0.0 879
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02298 - - vvo:131630044 1023.85