Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02292 ATGGAACGTGTTGAAGATGAACATGTTTCACAGGTAGTCGTAAAGGCGGTAGATGTCGGCGGTGACTTTAATAACAAGCAAGAGTTTGATGATCGTGAAAGCATACCTACATGGATTCGTATGAATGCAACTAACCTTGGTTTTGGTGCCGTAATAGGAAGATCAGATAATGGTACGGCAAGAAGAAACACTTTTGTAACAATGTTGTGCGAAAGAAGCGGGAAATACCATCCTCCTCTAAGGAAGTTTAGAAGAGACGACACGGGTACTAGAAAATGTGAGTGTCCGTTTAAAATCCGTGGTTACATGTTGACTAGAAAGAAGTGGAGATTTAGTGTTATTTGTGGTTTGTATAACCATGACTTGTGCGGAAAATTACAAGGTCATCCTATTGTACATCGGCTCAATCCGAAAGAGAAGACATGTATTAATAACATGTCCTTGAATCTTATCCAACCAAAAAATATACTTGGCACATTGAAACGGAAGGAACCCGACATTAACCTGCGACGATGGGGTTATGGTCCGAGATATTTTTTGACTCATCCAGATTCGATAAAGTTGTTCAACACTCTTCAGAGAGTGCTCCTTCTCGATTCTACCTATAAGACCAACAAGTATAGACTTCCATTATTTGAGATGATCGGTGTTGCATCCAGCGAGAAGACATACGCTGTTGTTTTTTCCTTTTTGGAGTGTGAAAAAGAGGATAATATTAGATGGGCATTAGAGGTGTGTCGGTCACTTTTGAAGGAACATGTTGAGATGCCCAAGGCAATTGTTACAGACCACAATACCGCTTTGATGAATGTGGTGGAAAAGTTAAACAGTGTTTACCTGTATGGTTTAATAATATTCATAATTCATTTTTTTTTGTCACAGTCCTATATTGTATATTTAGGATCACACTCTTTCGGCTCAAATCCTTCATTACTTGATTCTGAATCTGTTACAAACTCTCACTATGATTTACTTGGATCTTATCTTGGAAGTACTGAGAAGGCTAAAGAAGCAATATTTTACTCTTATAATAAATATATTAATGGCTTTGCTGCAATACTTGAAGAAGATAAGGCAAAAGAGATTGCAAAACATCCAAATGTTGTATCGATGTTTTTAAATAAAAGATATGAACTACATACGACCCGATCGTGGAATTTTCTTGGGTTAGAGACGAACCGTGGATTTGCTAACGATTCAGTATGGAAAAAATCATTGGGTGAAGACATCATTATTGGAAATTTAGACACTGGTGTTTGGCCGGAATCAAAGAGTTTTAATGATGAAGGGTATGGGCCAATTCCAAAAAGGTGGAAAGGAATTTGTCAAGTTTCTAAAGGAAATCCTGATAAATTTTATTGCAACAGGAAACTCATTGGTGCAAAATATTTTTATAAAGGCTCTGAGGCACATCTCGGTGAAGCGGCAAATGTAAACTTTAATAGTGCACGTGACACCGTAGGCCATGGATCACATACTTTATCAACTGCTGGAGGTAATTTTGTTACCGGAGCTAATGTATTTGGCTTTGGAAATGGAACAGCAAGTGGTGGATCACCAAAAGCAAGAGTTGCAGCCTATAAAGTCTGTTGGGATGGATGTTATGATGCTGATATTTTGGCTGGTTTTGAAGCTGCCATAAGTGATGGTGTTGATGTACTTTCTGTGTCCTTGGGTGGAAAATTTCCACGAGAATTTTCGGAAAGTGCTATTTCCATAGGTTCCTTCCATGCTATTGCCAACAACATCGTTGTTGTGGCTTCTGGAGGAAATTCAGGACCTAAAATCTCATCTATAGTCAATGTCGAACCATGGACTTTCACGGTTGCTGCTAGCACAATTGATAGAGACTTCATAAGTTATGTTATTCTTGGTAACAAAAAAATATACAAGGGAGCTAGTCTTTCAGAGTTGGACTTACCACCTAACAAATCATATCCACTGATAAGTGCTGTAGATGCTAAACTTGATAACGCGCCTCCCGCATTTGCCTCTATTTGCAAAGAAGGAGCTCTTGATCCACAAAAGGTTAAAGGAAAAATATTGGTATGTCTTCGAGGTGCGGGTGCTAGAGCTGACAAGGGCGTGCAAGCTTCTCGTGTAGGTGCTATTGGAATGATATTGGCTAACGATGAGGATTCAAAGAATGGAGTTATAGCAGATACTCATGTCCTTCCCGCTACAAATGTTGGCTTTGCAGATGGCAGTGCCATTTTTAATTACATCAATCACACAACGTCCCCTGTGGCTTACATTACTAAAGTTAAAACAGAATTGAGCGTAAAGAACACACCAACTATAGCTTCATTTTCGTCAAGAGGCCCAAATGACCTTGATGGTTCAATTCTTAAGCCAGACATCACTGCACCAGGCGTCAGCATAATTGCAGCGTATACTCTAGCTAACTCTCCATCGGAACAACCATCTGATAAGCGTAGAGTTCCTTTTGTTACTATGTCAGGCACTTCAATGTCATGTCCTCATGCTGCTGGATTAGTTGGACTACTTAAATCTGTTCATCCTGATTGGAGTCCCGCTGCTATCAAGTCAGCAATAATGACCACAGCAACGACTAAAACCAACAATGGAGTTGAAATATTGGATTCATCACTAGAAAAAGCAACTCCTTTTGCATATGGTGCCGGCCACGTTCAACCTAATCTTGCAGTGGATCCTGGACTTGTATATGACCTTAATGTTACGGATTATTTGAACTATTTATGTGGTCGTTCATACACCAGTGACCAACTTAAGGTGTTTTACGGAAAACCTTACACTTGTCCAAAATCTTTCCGTCTAGCAGATTTCAATTATCCATCCATTTCAATTTATGAACTTGAAGTTTGGAAATCTTTGAATGTTACTCGTATCGTTACCAATGTTGGGCCACCAAGTGAGTATAGAGTGGAGATCCAGGAACCTCCACAATTTCATGTCACAGTTCAGCCTGAGATTTTAAGATTTAAAAATAAGGGTGAGAAAAAAGAGTTCAAGGTTACGATCACTATGAAGCCAAATAGTACATATATTACTGATTTTGAATTTGGGAAGTTGATTTGGACCGATGGAAAGCATCACGTTGGGACTCCTATTACAATAAAGTACAATGATTTGTGA 3117 0.3911 MERVEDEHVSQVVVKAVDVGGDFNNKQEFDDRESIPTWIRMNATNLGFGAVIGRSDNGTARRNTFVTMLCERSGKYHPPLRKFRRDDTGTRKCECPFKIRGYMLTRKKWRFSVICGLYNHDLCGKLQGHPIVHRLNPKEKTCINNMSLNLIQPKNILGTLKRKEPDINLRRWGYGPRYFLTHPDSIKLFNTLQRVLLLDSTYKTNKYRLPLFEMIGVASSEKTYAVVFSFLECEKEDNIRWALEVCRSLLKEHVEMPKAIVTDHNTALMNVVEKLNSVYLYGLIIFIIHFFLSQSYIVYLGSHSFGSNPSLLDSESVTNSHYDLLGSYLGSTEKAKEAIFYSYNKYINGFAAILEEDKAKEIAKHPNVVSMFLNKRYELHTTRSWNFLGLETNRGFANDSVWKKSLGEDIIIGNLDTGVWPESKSFNDEGYGPIPKRWKGICQVSKGNPDKFYCNRKLIGAKYFYKGSEAHLGEAANVNFNSARDTVGHGSHTLSTAGGNFVTGANVFGFGNGTASGGSPKARVAAYKVCWDGCYDADILAGFEAAISDGVDVLSVSLGGKFPREFSESAISIGSFHAIANNIVVVASGGNSGPKISSIVNVEPWTFTVAASTIDRDFISYVILGNKKIYKGASLSELDLPPNKSYPLISAVDAKLDNAPPAFASICKEGALDPQKVKGKILVCLRGAGARADKGVQASRVGAIGMILANDEDSKNGVIADTHVLPATNVGFADGSAIFNYINHTTSPVAYITKVKTELSVKNTPTIASFSSRGPNDLDGSILKPDITAPGVSIIAAYTLANSPSEQPSDKRRVPFVTMSGTSMSCPHAAGLVGLLKSVHPDWSPAAIKSAIMTTATTKTNNGVEILDSSLEKATPFAYGAGHVQPNLAVDPGLVYDLNVTDYLNYLCGRSYTSDQLKVFYGKPYTCPKSFRLADFNYPSISIYELEVWKSLNVTRIVTNVGPPSEYRVEIQEPPQFHVTVQPEILRFKNKGEKKEFKVTITMKPNSTYITDFEFGKLIWTDGKHHVGTPITIKYNDL 1038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02292 1038 Gene3D - 907 1035 - -
Vivi1g02292 1038 PRINTS Subtilisin serine protease family (S8) signature 820 836 IPR015500 -
Vivi1g02292 1038 PRINTS Subtilisin serine protease family (S8) signature 407 426 IPR015500 -
Vivi1g02292 1038 PRINTS Subtilisin serine protease family (S8) signature 485 498 IPR015500 -
Vivi1g02292 1038 Pfam PA domain 664 738 IPR003137 -
Vivi1g02292 1038 CDD Peptidases_S8_3 377 857 IPR034197 -
Vivi1g02292 1038 ProSiteProfiles Serine proteases, subtilase domain profile. 384 890 - -
Vivi1g02292 1038 Gene3D Peptidase S8/S53 domain 409 903 IPR036852 GO:0004252|GO:0006508
Vivi1g02292 1038 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 296 1032 IPR045051 -
Vivi1g02292 1038 FunFam subtilisin-like protease SBT1.5 615 759 - -
Vivi1g02292 1038 FunFam Subtilisin-like protease SBT5.3 289 380 - -
Vivi1g02292 1038 SUPERFAMILY Subtilisin-like 379 894 IPR036852 GO:0004252|GO:0006508
Vivi1g02292 1038 SUPERFAMILY PA domain 674 745 IPR046450 -
Vivi1g02292 1038 Pfam Subtilase family 407 881 IPR000209 GO:0006508|GO:0008236
Vivi1g02292 1038 FunFam Subtilisin-like protease SBT1.5 907 1036 - -
Vivi1g02292 1038 ProSitePatterns Serine proteases, subtilase family, serine active site. 821 831 IPR023828 -
Vivi1g02292 1038 Gene3D - 615 759 - -
Vivi1g02292 1038 FunFam Subtilisin-like protease SBT1.5 409 624 - -
Vivi1g02292 1038 Pfam MULE transposase domain 195 274 IPR018289 -
Vivi1g02292 1038 Pfam Fibronectin type-III domain 935 1033 IPR041469 -
Vivi1g02292 1038 Pfam Peptidase inhibitor I9 295 380 IPR010259 -
Vivi1g02292 1038 CDD PA_subtilisin_like 621 752 - -
Vivi1g02292 1038 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 292 380 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02292 Vivi-Chr1 48442049 48451409 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02292 293 1034 Subtilisin-like Serine Gene Family AT2G04160 55.200 0.0 796
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02292 - - vvo:131630044 2110.88