Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02287 ATGGCCGCCACCACCACCACCAGCCTAGGCGGAGGCGCAGACGATCGAGTTCTCGCTACCGCTCACCAGATCTTGAAAAGCCTCAAAGCTCCCAAAGAGGATCGTGAAGACATGTTATTGATTTTCTCCTCCTTCGATAACCGTTTATCCGGCATCACTGACCTAATCAACGGCGACGATTCCAAATCCTCCGAAGACGAAGAGCTTGACCGTTTCGAAGCCGCCGAGAAGATTATACTCGATGACTCTTCTACATACAGCGAGTCCTCTCGTCAATCGACTTCGCTTTTTGATCCTCCTAATGATCCTGTTGAGTATTTTCTCGCTGTTGATGAGATCATTCAGTGGATCGAACATTTCTCGATCTCGCCACCGGATCATTCAACCGAGAAAACTGATCGGATCATTTTGGATCGTGCCGAGAGCGCGATCCAATTAGCTATGTCGAGGCTCGAGGATGAGTTCCGTCATGTGCTGATTTGTAATACCATCCCGCCGAACGCTGTTAGCCGATGCAATACTAATCGGAGGAGTTCGCTGTCTTTCAGTTCGCAGGACGGTGGTATAGATGATAATTCTGGGAGTTTTGGTGAGGTAAGTGATGCTGGTTCTAATAGGTTTCATGAGCGTGGTGTTAGTATAGGAGATGATTTGTTTGTGGATTTAGTGCGTCCTGAATCGATTCTGAATTTGAAAGATATTATTGATAGGATGGTTAGGTCTGGTTATGAGAGGGAGTGTCTTCAGGTTTATAGTAGTGTTCGTCGTGATGCTTTGATTGAGTGTTTGACTATTCTGGGTGTTGAGAAGATGAGTATTGAAGAGGTTCAGAAGGTTGAGTGGAAGAGTCTGGATGAGAAAATGAGGCATTGGGTGCAAGCGGTTAAGGCTGTTGTTGGGATTTTGTTGAGTGGGGAGAAAAGGCTATGTGATAGTCTTTTTGGTGAATTTTATGATTTGAAGGATACATGTTTCAATGAAACTGCTAAAGCCTGTGTCATGATGTTGTTGAATTTTGGTGAAGCTGTTGCCATTTGTAAGAGGTCGCCTGAGAAGTTGTTTAGGATATTGGATATGTATGAGGCTTTGAGAGATGCTTTGCCTGATTTGGAGGAAATGGTTTTGGATGATCTTGTGATCACGGAGGCAAAGGGTGTGCTCAAAGGACTTGGTGAAGCTGTAAAAGGGACATTTGCTGAATTTGAGAATTGTATTCGGAATGAGACTTCTAGAAAGCCGGTTATAACTGGGGATGTTCATCCTTTGCCTCGTTATGTTATGAATTACCTGAAACTGCTTGTTGATTATAGTGATACTATGGATTCGCTTTTAGAAATCACTGAAGAGGCTCTTTATCACTTTACAAATGATTTGGGGGGTGAGGTTTCACAGTTAGAGGATTTGTCTCCTTTAGGCCGACAAATACTGTTGTTAATGTCCGAACTTGAGCACAATCTTGGAGAAAAAGCAAAACTTTATGAAGACATTGCATTGCAGCAGGTTTTTTTGATGAACAATCTCTATTACCTAGTGCGCAAAGTGAAGGACTCGGAACTTAAAGATGTTTTGAGAGAAAAATGGATTCGTAAACGCAGCGTTAAGGTACGACAGTACTCCACAGGATACCTTAGAGTCTCTTGGAGCAAGGCCTTGTCGTGTTTGAAGGATGAAGGGATTGGAGGGAGCTCTAACAGTGCATCAAAGATGGCTTTGAAGGAGAGGTTCAAGAATTTCAATGCATGTTTTGAAGAAATATACAGGGTTCAGACAGGTTGGAAGGTGCCTGACGTGCAGCTTCGTGAAGAGATGCGAATTTCTATATCTGAGAGGGTGATTCCTGCATACCGTTCATTTGTTGGGAGATTTAGCTGTCAGCTGGAAGGGAGACATTCAAGCAAATACATTAAGTATTCGCCAGAGGATCTAGAGACTTTTTTATCAGATTTATTTGAAGGATCCCCTGCTGTATTGCATCACATAAGGAGAAAGAGTTCATAG 1998 0.4319 MAATTTTSLGGGADDRVLATAHQILKSLKAPKEDREDMLLIFSSFDNRLSGITDLINGDDSKSSEDEELDRFEAAEKIILDDSSTYSESSRQSTSLFDPPNDPVEYFLAVDEIIQWIEHFSISPPDHSTEKTDRIILDRAESAIQLAMSRLEDEFRHVLICNTIPPNAVSRCNTNRRSSLSFSSQDGGIDDNSGSFGEVSDAGSNRFHERGVSIGDDLFVDLVRPESILNLKDIIDRMVRSGYERECLQVYSSVRRDALIECLTILGVEKMSIEEVQKVEWKSLDEKMRHWVQAVKAVVGILLSGEKRLCDSLFGEFYDLKDTCFNETAKACVMMLLNFGEAVAICKRSPEKLFRILDMYEALRDALPDLEEMVLDDLVITEAKGVLKGLGEAVKGTFAEFENCIRNETSRKPVITGDVHPLPRYVMNYLKLLVDYSDTMDSLLEITEEALYHFTNDLGGEVSQLEDLSPLGRQILLLMSELEHNLGEKAKLYEDIALQQVFLMNNLYYLVRKVKDSELKDVLREKWIRKRSVKVRQYSTGYLRVSWSKALSCLKDEGIGGSSNSASKMALKERFKNFNACFEEIYRVQTGWKVPDVQLREEMRISISERVIPAYRSFVGRFSCQLEGRHSSKYIKYSPEDLETFLSDLFEGSPAVLHHIRRKSS 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02287 665 PANTHER EXOCYST COMPLEX PROTEIN EXO70 67 652 IPR004140 GO:0000145|GO:0006887
Vivi1g02287 665 Pfam Exo70 exocyst complex subunit 290 648 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vivi1g02287 665 Gene3D Exocyst complex component Exo70 85 657 - -
Vivi1g02287 665 SUPERFAMILY Cullin repeat-like 100 651 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02287 Vivi-Chr1 48271293 48273863 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02287 15 664 EXO70 exocyst subunit family AT5G50380 56.701 0.0 713
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02287 K07195 - gmx:100818693 1019.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g02287 1 48271293 48273863 Vivi1g02287 1 48271293 48273863 ECH