Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02251 ATGAAGAAGGTCACTATAATTGCATCCATTTTCCTCTTCTCGATGCTTCGTTTTCAACAATTCGTACACGTTTCTTCATCCCCTCTCTCATACGGAAACCAGGAGGATGCTCCTGAAGTGCGCTGCTCCAGAGATAGAAGTAGGGCTGCATGGAAAGTTATAGACGAGTATTTAACACCATTTGTGGAGAAAGAAAACTACGAGCTTTCAAAAAAGTGCAGACTTCACCCTGAGAATGATATGTTTAGGGATCAAGAAGAGCATAAAATTTACTTAGACAGAAATGAATGGCGCTGTGGATATTGCAAGAAAAGCTTCCGCGACGAAAAGTTTATTGATCAGCATTTTGATAAAAGGCACTACAATCTTCTGGATCTAAGTCATGGAAAATGCTTGGCTGATTTATGCGGGGCATTACACTGTGATGCTGCGATAAATTCCAAGTCCTCTAGAAGCAAGTGTAATCCAGCAGCTGCTGCAAGAAATCGTCACCTATGTGAGAGTCTTGCTGACAGTTGTTTTCCTATAAGCGAGGGTCCATCAGCAAGCCGCCTTCATGAGTTGTTTCTGCACCAATTTTGTGAAGCTCACTCCTGCTCAGGGAAACATAAACCCTTCTCTAGAGGAGGCAAGGATCAAGGAAGTTTCTTTCGCCTGGCTGTTGGAGCATTGGTCTTGGTGCTACTTCCTGTGTTCTATCTCTTTCTTTATTTGATACAAAGTGATATGAAGGGTCGAACTCAAGAGCTTCGTCGCATCTCTAAAGCTGGATGGAAAGCAAAGCCAGCGTGA 792 0.4318 MKKVTIIASIFLFSMLRFQQFVHVSSSPLSYGNQEDAPEVRCSRDRSRAAWKVIDEYLTPFVEKENYELSKKCRLHPENDMFRDQEEHKIYLDRNEWRCGYCKKSFRDEKFIDQHFDKRHYNLLDLSHGKCLADLCGALHCDAAINSKSSRSKCNPAAAARNRHLCESLADSCFPISEGPSASRLHELFLHQFCEAHSCSGKHKPFSRGGKDQGSFFRLAVGALVLVLLPVFYLFLYLIQSDMKGRTQELRRISKAGWKAKPA 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02251 263 ProSitePatterns Zinc finger C2H2 type domain signature. 99 120 IPR013087 -
Vivi1g02251 263 PANTHER ZINC FINGER PROTEIN-RELATED 6 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02251 Vivi-Chr1 47462878 47466795 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02251 36 263 C2H2 Transcription Factor Family AT5G63280 63.596 2.94e-107 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02251 - - ccaj:109814494 418.698