Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02213 ATGCTACTCATAATAATCTCTTCCATCTTTCTCATCTTTTTTATGATAATCAAATGGTATCTCAATTCTACAAAAACCAAAAACTCACCACCCTCTCCTCCAAAATTACCTATAATAGGAAATCTCCATCAACTTGGCCTATTCCCTCACCGCACACTTCAATTTCTAGCTAAACAATATGGCCCTTTCATGCAAATCCATCTTGGTAGTGTACCAGTTCTTGTAATCTCATCACCTGAAGCAGCAAGTGAGATTATGAAAACTCATGACCGCGTCTTTGCAAACAGACCCCAAACTAAACTTTATGACATACTTTTATATGATTGCAAAGATGTTTCTGCAGCTCCATATGGAGAGTATTGGAGACAGATAAGGAGTATATCTGTTTTACATCTTCTTAGTGCCAAAAGGGTTCAATCTCTTCGTGCTGTGAGAGAGGAAGAAGTTGGTTTTATGGTGGAGAAAATAAAGCAGTGTTCTTCTGCTTCAGTGGCAGTGAATATAAGTGAATTAGTCTCCACAACTATCAATTGTATAGTTTGTAGGGTTGCTTTGGGGAGAAAGTATAGCGGTGAAAGTGGGAAGGGGTTTAAGAAGTTGTTGATGGATTTTACAGAGTTACTTGGTACTGTTATTGTTGGTGACTATGTTCCGTGGCTTGATTGGGTGACCCATGTTTCTGGGGTTTATGCAAGAGCTAAAAGAGTTGCTAAACAGTTTGATGATCTTTTGGAGGATGTTGTTGAAGAGCATATAAATAAACAGAAAGGAGACAGTGATTGTTCAAGTGCTGAAGAACATGGTGACTTTGTTGATGTTTTGCTTTGGATACAAAGGACAGAGTCACTTGGCTTTCCAATTGACAGAACTGTCATAAAAGCTCTGTTATTGGACATGTTTTCTGCTGGTACAGACACCATATCCACTTTGCTAGAGTGGGCAATGACAGAACTTTTAAGACACCCAAATATCATGAAGAAATTACAAGAAGAAATAAGGAGGGTAGCTTGTGATAAAACAAACATCACTGAAGATGATTTAGGTAACCTGAAATATTTACCGGCAGTGATTAAAGAAACCCTGCGATTACATCCCCCGATCCCATTACTAGTCCCTCGAGAAAACAGACAAGATATCAAAGTAAAGGGCTACGACATCAAAGCTGGGACAAGAATACTTATAAATGCTTGGGCCATTGCAAGAGATCCCACATATTGGGAACAACCTGAAGATTTCAAGCCAGAGAGATTCTTGAATAATGAGATAGACATGAAAGGGAATGATTTCCAATTGATTCCATTTGGAGCAGGGAGAAGAGGTTGTCCAGGGATAGTTTATGCTATGGCTGCCGGTGAAATTGTGTTAGCGAACCTTGTGCATAAATTTAACTGGGAATTACATGGTGGTGGTGCAGGATTGGAAAAGTTGGACATGTCTGAAACATTTGGCTTAACCATGCATAGAAAGACTCCTCTTGAAGCTGCTGCAACACTTAATGGTTTCTAA 1506 0.3924 MLLIIISSIFLIFFMIIKWYLNSTKTKNSPPSPPKLPIIGNLHQLGLFPHRTLQFLAKQYGPFMQIHLGSVPVLVISSPEAASEIMKTHDRVFANRPQTKLYDILLYDCKDVSAAPYGEYWRQIRSISVLHLLSAKRVQSLRAVREEEVGFMVEKIKQCSSASVAVNISELVSTTINCIVCRVALGRKYSGESGKGFKKLLMDFTELLGTVIVGDYVPWLDWVTHVSGVYARAKRVAKQFDDLLEDVVEEHINKQKGDSDCSSAEEHGDFVDVLLWIQRTESLGFPIDRTVIKALLLDMFSAGTDTISTLLEWAMTELLRHPNIMKKLQEEIRRVACDKTNITEDDLGNLKYLPAVIKETLRLHPPIPLLVPRENRQDIKVKGYDIKAGTRILINAWAIARDPTYWEQPEDFKPERFLNNEIDMKGNDFQLIPFGAGRRGCPGIVYAMAAGEIVLANLVHKFNWELHGGGAGLEKLDMSETFGLTMHRKTPLEAAATLNGF 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02213 501 Pfam Cytochrome P450 30 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g02213 501 SUPERFAMILY Cytochrome P450 30 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g02213 501 CDD CYP71-like 59 492 - -
Vivi1g02213 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Vivi1g02213 501 FunFam Cytochrome P450 83B1 16 495 - -
Vivi1g02213 501 Gene3D Cytochrome P450 21 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g02213 501 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g02213 501 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g02213 501 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g02213 501 Coils Coil 325 345 - -
Vivi1g02213 501 PANTHER CYTOCHROME P450 71B11-RELATED 15 496 - -
Vivi1g02213 501 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g02213 501 PRINTS E-class P450 group I signature 81 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g02213 501 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g02213 501 PRINTS E-class P450 group I signature 175 193 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g02213 501 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g02213 501 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g02213 501 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g02213 501 PRINTS E-class P450 group I signature 57 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g02213 501 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02213 Vivi-Chr1 46497164 46499338 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02213 25 497 Cytochrome P450 AT3G48270 50.633 7.50e-178 507
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02213 - - gmx:100806940 615.92