Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02208 ATGTCTGCCTCAGTTCAACATGTGATAGAAAAACCAATGGCTCTCAGAAAATGGTCACATGAACAAATTACACAAGCTTTTTCTTCTCTCTTTATTCCATCTCTTTTTTTCCTTATAAGCCTGTTAATTGTGTTTAAGTATGCAATTAGAAAAACCAAAACCAAAACCAATCTTAATCAACTTCCATCTCCACCAAAACTACCATTCATCGGTAATCTTCATCAGCTAGGCACACTTCCACATCGGTCTCTACGAGACCTATCACTCAAATATGGCAACATGATGTTGTTGCAATTAGGACAAAAACAAACTCCAACTCTAGTGATTTCATCAGGAGAAGTAGCCATGGAAATCATGAAAAATCATGATATAGTTTTTTCAAACCGACCGCAACATATTGCTCCAAAAATCTTATTGTATGGTTGTACGGAAGTTGGTTTTGGAAATTATGGAGAAAATTGGAGGCAGAAAAGAAAAATATGTGTTCTAGAACTTTTGAGTGTAAAAAGTGTAAAATCATTTCAGGGTATTAGAGAAGAAGAAGTTGAAGAAATGGTGAGTAAGCTACGTGAAGCTAGCTCGAAGAAGACATGCGTGAATCTTAGTAAGATGTTTGTTTCAACAACAAACAATATTGTTTGTAAAAGTGCTCTTGGAAGGAAGTGTGAAGGAGATGGAAACGTGAAAGAGTTAGCTAGAAAAGTTATGATTTATCTTACAACTTTTGTGGTTGGAGATTATTTCCCTTCTTTGGGTTGGATTGATGTTCTTAGTGGAAAAATTGGAGAATTTAAGGATACTTTTCGAGCACTTGATGCTTTGTTTGATAAAGTGATTGAAGAGCGTTTGGCTTTGAAGAAGATAGAAAAAGATCAGTTCGAGAAGAAAGGGTTTGTTGATATGCTTCTTCAATTAAAAGAGGATGGCATGCTTGGCTTTGAACTTACCAATAATGATATTAAAGGAATTTTAATGGACATGTTTGTTGGAGGAACTGACACAACATCAGCAACATTAGAATGGACAATATCAGAGCTCGTGAGACATCCATCCACAATGAAGAAAGTACAAGAAGAAGTACGGAGAGTTGTAAGCAATAAATCAAAAGTTGAAGAAAGCGACATAAATCAAATGCCCTTTTTAAAATGTGTAGTGAAAGAAATTCTAAGGTTACATCCAGCTACTCCTCTAATGGCTCCTCGAGAAACAATGTCAAGAGTGAATCTAAAAGGGTATGATATTCCTGAAAAAACAATGGTGTATGTAAACAATTGGGCAATACAAAGAGACCCTAAAAATTGGGAAAATCCTGAAGAGTTCATTCCAGAGAGATTTGAACACAGCCAAGTTGATTTTAGAGGCCAAGATTTCCAATTCATTCCTTTTGGTTTTGGGAGAAGAGGATGTCCAGGAGTGAATTTTGGAATAGCTACTGTTGAATATATACTTGCTAACCTTCTTTATTGGTTTGATTGGGAAACAAAATCAGGTAAACAAGATATAGATATGAGTGAAGTATTTGGACTTGTTGTATCAATGAAAGAACCACTTCACCTTAAACCAATAGCATTTTCATTTTAA 1581 0.3523 MSASVQHVIEKPMALRKWSHEQITQAFSSLFIPSLFFLISLLIVFKYAIRKTKTKTNLNQLPSPPKLPFIGNLHQLGTLPHRSLRDLSLKYGNMMLLQLGQKQTPTLVISSGEVAMEIMKNHDIVFSNRPQHIAPKILLYGCTEVGFGNYGENWRQKRKICVLELLSVKSVKSFQGIREEEVEEMVSKLREASSKKTCVNLSKMFVSTTNNIVCKSALGRKCEGDGNVKELARKVMIYLTTFVVGDYFPSLGWIDVLSGKIGEFKDTFRALDALFDKVIEERLALKKIEKDQFEKKGFVDMLLQLKEDGMLGFELTNNDIKGILMDMFVGGTDTTSATLEWTISELVRHPSTMKKVQEEVRRVVSNKSKVEESDINQMPFLKCVVKEILRLHPATPLMAPRETMSRVNLKGYDIPEKTMVYVNNWAIQRDPKNWENPEEFIPERFEHSQVDFRGQDFQFIPFGFGRRGCPGVNFGIATVEYILANLLYWFDWETKSGKQDIDMSEVFGLVVSMKEPLHLKPIAFSF 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02208 526 CDD CYP71-like 90 517 - -
Vivi1g02208 526 FunFam Cytochrome P450 83B1 48 520 - -
Vivi1g02208 526 Coils Coil 353 373 - -
Vivi1g02208 526 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 462 471 IPR017972 GO:0005506|GO:0016705
Vivi1g02208 526 PANTHER CYTOCHROME P450 71B11-RELATED 42 521 - -
Vivi1g02208 526 Pfam Cytochrome P450 62 514 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g02208 526 Gene3D Cytochrome P450 46 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g02208 526 SUPERFAMILY Cytochrome P450 58 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g02208 526 PRINTS E-class P450 group I signature 208 226 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g02208 526 PRINTS E-class P450 group I signature 382 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g02208 526 PRINTS E-class P450 group I signature 423 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g02208 526 PRINTS E-class P450 group I signature 339 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g02208 526 PRINTS E-class P450 group I signature 88 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g02208 526 PRINTS E-class P450 group I signature 469 492 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g02208 526 PRINTS E-class P450 group I signature 319 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g02208 526 PRINTS E-class P450 group I signature 459 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g02208 526 PRINTS P450 superfamily signature 460 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g02208 526 PRINTS P450 superfamily signature 330 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g02208 526 PRINTS P450 superfamily signature 383 394 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02208 Vivi-Chr1 46404608 46410015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02208 50 518 Cytochrome P450 AT3G48270 45.127 8.36e-142 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02208 K20617 - gmx:100803384 677.552