Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02198 ATGAAAAGTCTTAATTCTAATTCTAATATCCCTAACTCTAAGCTAGAAGATGAAAAGAGTCTTAAGGAGGAGCTTTTGATTCCGATTCTAATGGCAGACCAAGTCATGAAAATGGCACAGGAAGCTAAATCATCCAAGCTGGAATGTCACGAACTAGCTACGAAGGTGGAGATACTCTGCGAAAGTCTCCGATGTGTAGTGCGAGCGGTGGAAGCGAACCACAAATCGTTGAACGATATACCAATTCGTCGCATGGTGAGAGAAGTTTCAAAGAATGTTGAAAAAACGTTCACACTGGTGCGGAGGTGCAAAAAGCAAGGAGGTATTGGTGTGCTGAAGCACATGTTAACAATGAGGTGTAATGGTGATTTTCGGAAAGTCTGCAACCTTCTAGAATCTTCTAACGGTGATATGTTGTGGTTGTTGAATATCTTTGAGTCTAAAGGGACTGATCTTTCAATCCCTCCTATTGCCTGTAATGATCCAATATTGGCTTTGGTCTGGACTTACATTTATACCCTTCAGCTTGGTAATCCTAGCGACCGTGCTGAAGCCGCGACGGAATTGGGCTCTATTGCTAAAATTAATGTTCGGAATAAGTTCATTATCATGGAGGAAGGTGGTGTTTTGCCTCTCCTTAAGGTTCTTAAGGATTCTTCTTTCCCTGAATGTCAAATTGCAGCTTCCAATGCTCTTGTTAACATTGTCTCTGATGATGATGATCAACAAAGGATCGTTCGATTTCTCATAAGCAATCTTGCAGTTCCTGCTATTGTTCAGGCTCTATCGGATGGAGTATTCAGAGTTCGAGTTTCGGTTGCTAATTTGGTCTCCGCTATGGCTGATCAAGACCTTCTTGCACGTGAGGAGTTTATACTGGCTAATGTGACTAAACCCCTGGTGTCGTTATTGTCAATTGATAATGTTATTGATGCTCGAAATGGCATCCATTCACTAGTTCTCAATATGTCTGAGGTTGGATATGATGGAAGCATTTGCAGAGAAAGAGAAGCTGATCAGAGCCCTGAGTTGAGGAATGATGTTAAAGTCAGTTGTGCTAAAGCTCTTTGGAAACTTTCTAAAGGGTGTCTATTAGCTTGCAAGAAAATTACGGAGACTAAAGGTTTGCTTTGTTTAGCTAAGATTATTGAGTCTGCAAGCGACAAGTTGAAGCTCAACTGTCTCATGGCTGTTATGGAAATTGCAGCCGTGGCAGAGTCCAATGCTGCTCTTAGAAGAAATGCTTTTAGGTCTACCGCACCCGCGGCTAAGGAAGTTTTGGATAAGCTTTTGAAGGTGGTTCGGGAAGAGAGTGATTCTAAATTCCTAATTCCAGCTATTAAGTCAATTGGGTCCTTAGCTAAAAACTTTCCTGGAAAGGTTCCTCATGTTATCGGTCCCTTGATTTCACACCTTCGAAATAGGGATTTAAATGTGGCAAGGGAAATAGTTGTTGCATTGGAAAAGTTTGTTTGTGACGACAACTACAACCGCGTCGACCATTCTAAGATAATCCTTGAGCTTGACGGAATTCCCAAGCTAATGAGGTGGCTACAAGTAAATGATCATCAACAAGTGCATGGCCTAAAATTGCTTTGTTATCTTGCGATAAATGTTGGCAATAGTAAGGTTCTTGAGCAAGAGCATGTATTGATTAGTTTGGAGAAATTTGCTCATTCTGTTTTAGCTCAAAATCCTGACTTGAAAGAATTGTTCGGAAAGGCTATTGATCACCTCACTCTTTTTCAGCCAGGAGTTCATTATTACAGACAACCTTTGGGATTGTGA 1788 0.4111 MKSLNSNSNIPNSKLEDEKSLKEELLIPILMADQVMKMAQEAKSSKLECHELATKVEILCESLRCVVRAVEANHKSLNDIPIRRMVREVSKNVEKTFTLVRRCKKQGGIGVLKHMLTMRCNGDFRKVCNLLESSNGDMLWLLNIFESKGTDLSIPPIACNDPILALVWTYIYTLQLGNPSDRAEAATELGSIAKINVRNKFIIMEEGGVLPLLKVLKDSSFPECQIAASNALVNIVSDDDDQQRIVRFLISNLAVPAIVQALSDGVFRVRVSVANLVSAMADQDLLAREEFILANVTKPLVSLLSIDNVIDARNGIHSLVLNMSEVGYDGSICREREADQSPELRNDVKVSCAKALWKLSKGCLLACKKITETKGLLCLAKIIESASDKLKLNCLMAVMEIAAVAESNAALRRNAFRSTAPAAKEVLDKLLKVVREESDSKFLIPAIKSIGSLAKNFPGKVPHVIGPLISHLRNRDLNVAREIVVALEKFVCDDNYNRVDHSKIILELDGIPKLMRWLQVNDHQQVHGLKLLCYLAINVGNSKVLEQEHVLISLEKFAHSVLAQNPDLKELFGKAIDHLTLFQPGVHYYRQPLGL 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02198 595 Gene3D - 27 144 IPR036537 GO:0007166
Vivi1g02198 595 Gene3D - 173 327 IPR011989 -
Vivi1g02198 595 PANTHER ARMADILLO REPEAT ONLY 4 20 583 - -
Vivi1g02198 595 SUPERFAMILY ARM repeat 177 569 IPR016024 -
Vivi1g02198 595 Gene3D - 337 584 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02198 Vivi-Chr1 46149120 46151487 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02198 166 274 U-box Gene Family AT3G46510 33.945 6.81e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02198 - - cam:101506293 828.55