Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02187 ATGGAATCAAACCCCACAAATACAACCAAGTTCCTCTTTAGCTACGGCGGTAAAATCCTTCCCCGCCACACCGACGGCAAGCTCCGCTATGCCGGCGGCCACACCAGAGTCCTCGCCCTCTCTCTCCCCATTTCTTTCTCGGAGTTGATGGTGAAGTTTGTAGAATTATGTGGTTCATCTGTTACACTCAAGTGTCCATTACCAAACGGAGATTTAGAGACATTGGTTTCAATCACTAGCGATGAAGATCTGAAAAATATAATTGAAGAATACGAACGAGCTTCTTCATCGTTACCTCATCCATTGAAGATTAGAGCTATTCTTTCATCTCCCAAATCTCTCAAGAAAGTATCTCCTCCACAATCTTCTTCATCAAGCGCGACGTACTCTCCATCTGGTTCGCTTTATAATTCTGTGGAATCACCACCGTATGTGGCCGTGAATCGGCGGTGTTGCTCGCCGGTTTCTCTAGGGTTTCCGATTGGTATTCGAAATGGGGCGGTGAAAGGTGGTTGTTACACGCGGCAATTACATGGAAGCCCTAGATTCCTCTATGGATGTGGTAATAATTATTGTCAATGA 582 0.4553 MESNPTNTTKFLFSYGGKILPRHTDGKLRYAGGHTRVLALSLPISFSELMVKFVELCGSSVTLKCPLPNGDLETLVSITSDEDLKNIIEEYERASSSLPHPLKIRAILSSPKSLKKVSPPQSSSSSATYSPSGSLYNSVESPPYVAVNRRCCSPVSLGFPIGIRNGAVKGGCYTRQLHGSPRFLYGCGNNYCQ 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02187 193 PANTHER OS05G0427100 PROTEIN-RELATED 3 138 - -
Vivi1g02187 193 MobiDBLite consensus disorder prediction 113 136 - -
Vivi1g02187 193 SMART PB1_new 23 109 IPR000270 GO:0005515
Vivi1g02187 193 SUPERFAMILY CAD & PB1 domains 25 117 - -
Vivi1g02187 193 MobiDBLite consensus disorder prediction 114 136 - -
Vivi1g02187 193 CDD PB1_UP2 14 108 - -
Vivi1g02187 193 Gene3D - 27 108 - -
Vivi1g02187 193 Pfam PB1 domain 25 95 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02187 Vivi-Chr1 45926059 45927082 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02187 7 90 MAP Kinase Kinase Kinase AT2G35050 53.571 9.95e-24 95.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g02187 1 45926059 45927082 Vivi1g02187 1 45926059 45927082 ECH
Vivi1g02187 1 45926059 45927082 Vivi3g03955 3 68571629 68572625 PCT