Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02184 ATGGAAACCCCACTGTTCCACTTCCTCTACCTCCTCCTCCTCCACCTCCTTATCCCCTCCACTCTCGCCCTCAATTTCCTCTTCAACTCCTTCAACACCACCGCAAACCTCACACTCATCAACGACACCCGCGTCGAATCCTCCATCCTCCGCATGACCAACGACACCAACAAATTCTCTCTCGGAAGAGTTTTCTACCCCGTCAAACTCCCCATGAAACCATCTTCCAATTCCTCAAACATCACTTCTTTCTCCACTTCCTTCATCTTCTCCATCTTACCTGATATCCCCAATAGCCCCGGCTTCGGTCTCGCTTTCGTCCTCTGCAACACAACCTCCCCTCCCGGCGCATTATCCAGTCAATACTTCGGTTTATTCTCAAGCGGTAAAACCGCTACCGTTTTCCCTCTTCTCGTCGTCGAATTCGATACCGGACAAAACCCTGAGTTCAACGACGAGAACAACAACCATATCGGAATTGATCTCAATAGCATCTTATCCAAAACCCAAACATCTGCCGGATACTTCAATTCCACCGGAAGCTTCATACCGGTTCAAATGAACAGCGGCGAAAACATTCGAGCTTGGTTCGATTTCGACGGCAAGAATTTGGAGATAAACGTTACAGTTGCTCCGGTTGGTGTTTCACGACCTTCAAAGCCAACGCTTTCGTATAAAAATCCTGAAATAGCTAATTATATTTCTCCCGAAATGTTTGTTGGATTTTCTGCTTCAAAAACAAATTGGATTGAAGCACAGAGAGTTCTCGCGTGGAGCTTTAGCGATTCAGGGACTGCAAGGGAGTTAAACACGGTGAATTTACCGGTGTTTAAGCGAAAATCGTCGTCTTCGCTTTCTGGCAAAGCGATTGCAGGGATTGTAGTTGGTTGTTTTGTTTTTGTTTTGAGTTGTGCGAGTGTGTTTATATTATATTTTCGGTGGCGAAAAAACAAAAGAAAACAAGATGAAGATGATGTTGAAGATTGGGAAATGGAGTATTGGCCTCATAGATTCTCTTACGAGGAACTAAGCATAGCAACAAAGGGTTTTCAAAAGGTTATAGGTTATGGAGGATTTGGAAGTGTTTACCAAGGGACTCTAATGAACAAAACATTGGTTGCGGTTAAACGAGTTAAACATGATTCTAAACAAGGGTTAAAAGAATTCATGGCGGAAATTTCAAGTATGGGAAGACTTCAGCATAAGAATTTAGTACAGATGCGTGGATGGTGTAGAAAGGGTAATGAACTCATGTTGGTTTATGATTACATGCCTAATGGAAGCTTAAACAAATGGATTTTTGATAAACCCCTGCAAATTCTGGGATGGGATCAACGCCGTAGGATTCTTGTTGATGTTGCAGAGGGGCTAAACTATCTTCATCATGGTTGGGACCAAGTTGTTATTCATAGGGATGTTAAGTCTGGTAACATTTTGTTGGATGCCGATATGAGGGGAAGATTGGGAGATTTTGGTTTGGCAAAGCTATACCAACATGGACAAGTTCCGAATACGACACGTGTGGTGGGAACGTTGGGGTATTTGGCGCCAGAAGCTGCGACGGCTGCAGCGCCAACTTCAGCTAGTGATGTGTATAGTTTTGGTGTGGTGCTGTTGGAGGTGGCTTGTGGGAGAAGGCCGTTGGAGACGAATGTAGAGGTGGAGGAAATTGTGCTTGTTGATTGGGTGAGGGAATTGTATGCAGGAGGGGGTGTGGTTGAAGCTGCTGATTCTAGGATTAAGGGTGAGTATGATGTGGAGGATATGGAGATGGTATTGAAGCTTGGGTTGGCTTGTTGTCATCCCGACCCGAATAGGAGACCTACCATGAAGGAAGTTGTTGCGTTTCTTCTTGGAGAGGATGTGGCGGAGGCGCCGGGGAAAGTTTTGTCCGATTTGGCTAACGGTGATGACAATGATGGTGGTGGCGGCGGGGAATCGAATGAAGAGGCCCCTTTACATTCCTCTTCTCCTATTTGA 1980 0.4525 METPLFHFLYLLLLHLLIPSTLALNFLFNSFNTTANLTLINDTRVESSILRMTNDTNKFSLGRVFYPVKLPMKPSSNSSNITSFSTSFIFSILPDIPNSPGFGLAFVLCNTTSPPGALSSQYFGLFSSGKTATVFPLLVVEFDTGQNPEFNDENNNHIGIDLNSILSKTQTSAGYFNSTGSFIPVQMNSGENIRAWFDFDGKNLEINVTVAPVGVSRPSKPTLSYKNPEIANYISPEMFVGFSASKTNWIEAQRVLAWSFSDSGTARELNTVNLPVFKRKSSSSLSGKAIAGIVVGCFVFVLSCASVFILYFRWRKNKRKQDEDDVEDWEMEYWPHRFSYEELSIATKGFQKVIGYGGFGSVYQGTLMNKTLVAVKRVKHDSKQGLKEFMAEISSMGRLQHKNLVQMRGWCRKGNELMLVYDYMPNGSLNKWIFDKPLQILGWDQRRRILVDVAEGLNYLHHGWDQVVIHRDVKSGNILLDADMRGRLGDFGLAKLYQHGQVPNTTRVVGTLGYLAPEAATAAAPTSASDVYSFGVVLLEVACGRRPLETNVEVEEIVLVDWVRELYAGGGVVEAADSRIKGEYDVEDMEMVLKLGLACCHPDPNRRPTMKEVVAFLLGEDVAEAPGKVLSDLANGDDNDGGGGGESNEEAPLHSSSPI 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02184 659 FunFam serine/threonine-protein kinase PBS1-like 315 423 - -
Vivi1g02184 659 Gene3D Transferase(Phosphotransferase) domain 1 424 626 - -
Vivi1g02184 659 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Vivi1g02184 659 SMART serkin_6 348 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g02184 659 Gene3D Phosphorylase Kinase; domain 1 319 423 - -
Vivi1g02184 659 SUPERFAMILY Protein kinase-like (PK-like) 326 617 IPR011009 -
Vivi1g02184 659 CDD STKc_IRAK 354 617 - -
Vivi1g02184 659 FunFam L-type lectin-domain containing receptor kinase S.4 424 628 - -
Vivi1g02184 659 MobiDBLite consensus disorder prediction 628 659 - -
Vivi1g02184 659 Gene3D - 23 277 - -
Vivi1g02184 659 Pfam Protein kinase domain 351 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g02184 659 Pfam Legume lectin domain 24 274 IPR001220 GO:0030246
Vivi1g02184 659 ProSiteProfiles Protein kinase domain profile. 348 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g02184 659 PANTHER - 31 620 - -
Vivi1g02184 659 ProSitePatterns Protein kinases ATP-binding region signature. 354 376 IPR017441 GO:0005524
Vivi1g02184 659 FunFam L-type lectin-domain containing receptor kinase S.4 22 268 - -
Vivi1g02184 659 CDD lectin_legume_LecRK_Arcelin_ConA 24 264 IPR001220 GO:0030246
Vivi1g02184 659 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 277 IPR013320 -
Vivi1g02184 659 CDD TM_EGFR-like 289 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02184 Vivi-Chr1 45862524 45864963 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02184 20 619 Receptor kinase-like Gene Family AT1G15530 63.934 0.0 769
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Vivi1g02184 Pkinase 7.7e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02184 - - gmx:100780660 957.977