Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02183 ATGGATACGGATACCCCACCGTTCCACTTCCTCTTCTTTCTCATCCTCATCCACCTCCTTATCCCCTCCACTCTCGCCCTCGATTTCCTCTTCAACTCCTTCAACACCACCGCCAACCTCACTTTCATCAACGACGCCCGGGTCGAATCCCCCGTCATCCGCATAACCAACGACACCAGCAAATTCTCTTTCGGAAGAGTTTTCTACCCCACCAAACTCCCCATGAAACCATCTTCCAATTCCTCAAACATCACTTCTTTCTCCACTTCATTCATCTTCTCCATCTTACCAGATATACCCGATAACCCCGGCTTCGGTCTCGCTTTCGTCCTCTGCAACACAACCTCCCCTTCCGAAGCATTATCTAGCCAATACTTCGGTTTATTCTCAGGCGCTAAAACCGCTACCGTGTTTCTTCTTCTCGTCGTCGAATTTGATACCGGACAAAACCCTGAGTTCAACGACGCGGACAACAACCACATCGGAATTGATCTCAATAGCCTCATATCCAAAGACCAAACACCTGCAGGATACTACAACTCCACCGGAAGCTTCGTACCTGTCCAAATGAACAGCGGTGAAAACATCCGAGCTTGGATAGATTTTGACGGCATGAATTTGGAGATAAACCTTACTGTTGCTCCGGTTGGTGTTTCACGACCTTCAAAACCAACGCTTTCGTATAAAGATCCTGAAATAGCTGATTATATTTCTCCTGAAATGTTTGTTGGATTTTCAGCTTCGGAAACGAATTGGATCGAAGCACGGAGAGTTCTCGCGTGGAGCTTCAGCGATTCAGGGACTGCGAGGGAGTTAAACACAGCTAATTTACCAGTGTTTAAGCGAAACTCATCTGGTTCACTTTCGGGGAAAGCGATAGCAGGAATTGCAGTTGGTTGTTTTGTTTTTGTTTTGAGTTGTGCTAGTGTATTTATATTATATTATCGGCGGCGGAAAAACAAAATAAAAGAAGATGAAAATGATGTTGAAGATTGGGAAATGGAGTATTGGCCTCATAGATTCTCTTACGAGGAACTAAGCATAGCAACAAAGGGTTTTCAAGAGGTTATAGGTTATGGAGGATTTGGAAATGTTTACAAAGGGACTCTAATGAACAAAACATTGGTTGCGGTTAAACGAGTTAAACATGATTCTAAACAAGGGTTAAAAGAATTCATGGCGGAAATTTCAAGTATGGGAAGACTTCAGCATAAGAATTTAGTACAGATGCGTGGATGGTGTAGAATGGGTAATGAACTTCTGTTGGTGTATGATTACATGCCGAATGGAAGCTTAAACAAATGGATTTTTGATAAACCTGTGCAAATTCTGGGATGGGATCAGCGCCGTAGGATTCTTGTTGATGTTGCAGAGGGGATTAACTATCTTCATCATGGTTGGGACCAAGTTGTTATTCATAGGGATGTTAAATCTGGTAACATTTTGTTGGATGCTGATATGAGAGGAAGATTGGGAGATTTTGGTTTGGCTAGGCTTTACCAACACGGGCAAGTTCCGAATAGGACAACTGTGGTGGGAACGTTGGGGTATTTCGCGCCAGAAGTTGCGAGGGCTGCAGCGCCAGCTTCGGCTAGTGATGTGTATAGTTTTGGGGTGGTGCTGTTGGAGGTGACTTGTGGGAGAAGGCCGTTGTTGAAGACGGATGTAGAGGTGGAGGAAATTGTGCTTGTTGATTGGGTGAGGGAATTGTATGCAGAAGGGTGTGTTTTTGAAGCTGTGGATTCTAGGATTAATGGTGAGTATGATGTGGATGATATGGAGATGGTGTTGAAGCTTGGGTTGGCCTGTTGTCATCCTGACCCGAGTAGGAGACCTACCATGAAGGAAGTTGTTGCGTTTCTTCTTGTGGAGGATGTGGCAGAGGCGCCGGGGAAAGTTTTGTCAGATTTGGCTAATGGTGATGACAATGGTGGTGGTGGCAGCAGGGAATCGAATAAAGAGGCCCCTTTGCATTCCTCTTCTCCTATTTGA 1992 0.4488 MDTDTPPFHFLFFLILIHLLIPSTLALDFLFNSFNTTANLTFINDARVESPVIRITNDTSKFSFGRVFYPTKLPMKPSSNSSNITSFSTSFIFSILPDIPDNPGFGLAFVLCNTTSPSEALSSQYFGLFSGAKTATVFLLLVVEFDTGQNPEFNDADNNHIGIDLNSLISKDQTPAGYYNSTGSFVPVQMNSGENIRAWIDFDGMNLEINLTVAPVGVSRPSKPTLSYKDPEIADYISPEMFVGFSASETNWIEARRVLAWSFSDSGTARELNTANLPVFKRNSSGSLSGKAIAGIAVGCFVFVLSCASVFILYYRRRKNKIKEDENDVEDWEMEYWPHRFSYEELSIATKGFQEVIGYGGFGNVYKGTLMNKTLVAVKRVKHDSKQGLKEFMAEISSMGRLQHKNLVQMRGWCRMGNELLLVYDYMPNGSLNKWIFDKPVQILGWDQRRRILVDVAEGINYLHHGWDQVVIHRDVKSGNILLDADMRGRLGDFGLARLYQHGQVPNRTTVVGTLGYFAPEVARAAAPASASDVYSFGVVLLEVTCGRRPLLKTDVEVEEIVLVDWVRELYAEGCVFEAVDSRINGEYDVDDMEMVLKLGLACCHPDPSRRPTMKEVVAFLLVEDVAEAPGKVLSDLANGDDNGGGGSRESNKEAPLHSSSPI 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02183 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672|GO:0006468
Vivi1g02183 663 SUPERFAMILY Concanavalin A-like lectins/glucanases 13 269 IPR013320 -
Vivi1g02183 663 Gene3D Phosphorylase Kinase; domain 1 322 426 - -
Vivi1g02183 663 FunFam L-type lectin-domain containing receptor kinase S.4 427 632 - -
Vivi1g02183 663 PANTHER - 44 621 - -
Vivi1g02183 663 SUPERFAMILY Protein kinase-like (PK-like) 328 622 IPR011009 -
Vivi1g02183 663 ProSiteProfiles Protein kinase domain profile. 351 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g02183 663 Pfam Protein kinase domain 354 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g02183 663 Pfam Legume lectin domain 27 277 IPR001220 GO:0030246
Vivi1g02183 663 FunFam L-type lectin-domain containing receptor kinase S.4 25 271 - -
Vivi1g02183 663 Coils Coil 315 335 - -
Vivi1g02183 663 SMART serkin_6 351 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g02183 663 CDD lectin_legume_LecRK_Arcelin_ConA 27 267 IPR001220 GO:0030246
Vivi1g02183 663 CDD STKc_IRAK 357 621 - -
Vivi1g02183 663 Gene3D - 26 280 - -
Vivi1g02183 663 MobiDBLite consensus disorder prediction 633 663 - -
Vivi1g02183 663 Gene3D Transferase(Phosphotransferase) domain 1 427 630 - -
Vivi1g02183 663 ProSitePatterns Protein kinases ATP-binding region signature. 357 379 IPR017441 GO:0005524
Vivi1g02183 663 FunFam serine/threonine-protein kinase PBS1-like 319 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02183 Vivi-Chr1 45850328 45852787 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02183 23 622 Receptor kinase-like Gene Family AT1G15530 61.803 0.0 726
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Vivi1g02183 Pkinase 4.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02183 - - gmx:100780660 905.205