Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02182 ATGGATACGGATACCCCACCGTTCCACTTTCTCTACTTTCTCCTCCTCCTCCTCCACCTCCTTATCCCCTCCACTCTCGCCCTCGATTTCGTCTTCAACTCCTTCAACACCACCGCCAACCTCACTTTCATAAACGACGCCCGCGTCGATTCCCCCGTCATCCGCATAACCAACGACACCAGCAAATTCTCTTTCGGAAGAGTTTTCTACCCCACCAAACTCCCCATGAAACCATCTTCCAATTCCTCAAGCATCACTTCCTTCTCCACTTCATTCATTTTCTCCATCTTACCAGATATCCCCGATAACCCCGGCTTCGGTCTCGCTTTCGTCCTCTGCAACACAACCTCCCCTTCCGAAGCATTATCTAGCCAGTACTTCGGTTTATTCTCAGGCGCTAAAACCGCTACCGTTTTTCCTCTTCTCGTCGTCGAATTTGATACAGGACAAAACCCTGAGTTCAACGACGCGGACAACAACCACATCGGAATTGATCTCAATAGCCTCATATCCAAAGACCAAACACCTGCAGGATACTACAACTCCACCGGAAGCTTCGTACCTGTCCAAATGAACAGCGGCGAAGACATCCGAGCTTGGATCGATTTTGACGGCATGAATTTGGAGATAAACGTTACTGTTGCTCCGGTTGGTGTTTCACGACCTTCAAAACCAACGCTTTCGTATAAAGATCCTGAAATAGCTAATTATATTTCTCCTGAAATGTTTGTTGGATTTTCAGCTTCGGAAACGAGTTGGATCGAAGCACGGAGAGTTCTCGCGTGGAGCTTCAGCGATTCAGGGACTGCGAGGGAGTTAAACACAGCTAATTTACCAGTGTTTAAGCGAAATTCATCGGGTTCACTTTCGGGCAAAGCGATTGCAGGGGTTGTAGTTGGTTGTTTTGTTTTTGTTTTGAGTTGTGTGAGTGTATTTATATTATATTATCGGCGGCGGAAAAACAAAATAAAAGAAAATGAAGATGATGTTGAAGATTGGGAAATGGAGTATTGGCCTCATAGATTCTCTTACGAGGAACTAAGCATAGCAACAAAGGGTTTTCAAGAGGTTATAGGTTATGGAGGGTTTGGAAATGTTTACAAAGGGACTCTAATGAACAAAACATTGGTTGCGGTTAAACGAGTTAAACATGATTCTAAACAAGGGTTAAAAGAATTCATGGCAGAAATTTCAAGTATGGGAAGACTTCAGCATAAGAATTTAGTACAGATGCGTGGATGGTGTAGAATGGGTAATGAACTTATGTTGGTGTATGATTACATGCCGAATGGAAGCTTAAACAAATGGATTTTTAATAAACCCGTGCAAATTCTGGGATGGGATCAGCGCCGTAGGATTCTTGTTGATGTTGCAGAGGGGATTAACTATCTTCATCATGGTTGGGACCAAGTTGTTATTCATAGGGATGTTAAATCTGGTAACATTTTGTTGGATGCTGATATGAGAGGAAGATTGGGAGATTTTGGTTTGGCTAGGCTTTACCAACACGGGCAAGTTCCGAATAGGACAACTGTGGTGGGAACGTTGGGGTATTTCGCGCCAGAAGTTGCGAGGGCTGCAGCGCCAGCTTCGGCTAGTGATGTGTATAGTTTTGGGGTGGTGCTGTTGGAGGTGACTTGTGGGAGAAGGCCGTTGTTGAAGACGGATGTAGAGGTGGAGGAAATTGTGCTTGTTGATTGGGTGAGGGAATTGTATGCAGAAGGGTGTGTTTTTGAAGCTGTGGATTCTAGGATTAATGGTGAGTATGATGTGGATGATATGGAGATGGTGTTGAAGCTTGGGTTGGCCTGTTGTCATCCTGACCCGAGTAGGAGACCTACCATGAAGGAAGTTGTTGCGTTTCTTCTTGTGGAGGATGTGGCAGAGGCGCCGGGGAAAGTTTTGTCAGATTTGGCTAATGGTGATGACAATGGTGGTGGTGGCAGCAGGGAATCGAATAAAGAGGCCCCTTTGCATTCCTCTTCTCCTATTTGA 1995 0.4516 MDTDTPPFHFLYFLLLLLHLLIPSTLALDFVFNSFNTTANLTFINDARVDSPVIRITNDTSKFSFGRVFYPTKLPMKPSSNSSSITSFSTSFIFSILPDIPDNPGFGLAFVLCNTTSPSEALSSQYFGLFSGAKTATVFPLLVVEFDTGQNPEFNDADNNHIGIDLNSLISKDQTPAGYYNSTGSFVPVQMNSGEDIRAWIDFDGMNLEINVTVAPVGVSRPSKPTLSYKDPEIANYISPEMFVGFSASETSWIEARRVLAWSFSDSGTARELNTANLPVFKRNSSGSLSGKAIAGVVVGCFVFVLSCVSVFILYYRRRKNKIKENEDDVEDWEMEYWPHRFSYEELSIATKGFQEVIGYGGFGNVYKGTLMNKTLVAVKRVKHDSKQGLKEFMAEISSMGRLQHKNLVQMRGWCRMGNELMLVYDYMPNGSLNKWIFNKPVQILGWDQRRRILVDVAEGINYLHHGWDQVVIHRDVKSGNILLDADMRGRLGDFGLARLYQHGQVPNRTTVVGTLGYFAPEVARAAAPASASDVYSFGVVLLEVTCGRRPLLKTDVEVEEIVLVDWVRELYAEGCVFEAVDSRINGEYDVDDMEMVLKLGLACCHPDPSRRPTMKEVVAFLLVEDVAEAPGKVLSDLANGDDNGGGGSRESNKEAPLHSSSPI 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02182 664 FunFam serine/threonine-protein kinase PBS1-like 320 427 - -
Vivi1g02182 664 MobiDBLite consensus disorder prediction 634 664 - -
Vivi1g02182 664 ProSitePatterns Protein kinases ATP-binding region signature. 358 380 IPR017441 GO:0005524
Vivi1g02182 664 Gene3D Transferase(Phosphotransferase) domain 1 428 631 - -
Vivi1g02182 664 SUPERFAMILY Protein kinase-like (PK-like) 329 623 IPR011009 -
Vivi1g02182 664 ProSiteProfiles Protein kinase domain profile. 352 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g02182 664 Coils Coil 316 336 - -
Vivi1g02182 664 Pfam Legume lectin domain 28 278 IPR001220 GO:0030246
Vivi1g02182 664 SUPERFAMILY Concanavalin A-like lectins/glucanases 15 270 IPR013320 -
Vivi1g02182 664 CDD STKc_IRAK 358 622 - -
Vivi1g02182 664 CDD lectin_legume_LecRK_Arcelin_ConA 28 268 IPR001220 GO:0030246
Vivi1g02182 664 SMART serkin_6 352 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g02182 664 Pfam Protein kinase domain 355 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g02182 664 Gene3D - 26 285 - -
Vivi1g02182 664 PANTHER - 39 622 - -
Vivi1g02182 664 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
Vivi1g02182 664 FunFam L-type lectin-domain containing receptor kinase S.4 428 633 - -
Vivi1g02182 664 Gene3D Phosphorylase Kinase; domain 1 323 427 - -
Vivi1g02182 664 FunFam L-type lectin-domain containing receptor kinase S.4 26 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02182 Vivi-Chr1 45841848 45844194 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02182 24 623 Receptor kinase-like Gene Family AT1G15530 61.639 0.0 726
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Vivi1g02182 Pkinase 3.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02182 - - gmx:100780660 880.552